prot_A-nodosum_M_contig9765.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9765.1.1
Unique Nameprot_A-nodosum_M_contig9765.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length81
Homology
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BLAST of mRNA_A-nodosum_M_contig9765.1.1 vs. uniprot
Match: A0A6H5KGW0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW0_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 3.290e-9
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:    1 QPPVRRDYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVLEHMAMQAVVNGFIMLEKW 58
            QP  R++Y + +GGVDV DQ+   +   HRPM +FW RVL+    QAV N +++  +W
Sbjct:  182 QPLARKEYVKNIGGVDVADQRLSAHAHTHRPMTFFWGRVLDQKFAQAVSNAWLLFFEW 239
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9765.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGW0_9PHAE3.290e-943.10DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9765contigA-nodosum_M_contig9765:5028..5270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9765.1.1mRNA_A-nodosum_M_contig9765.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9765 5028..5270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9765.1.1 ID=prot_A-nodosum_M_contig9765.1.1|Name=mRNA_A-nodosum_M_contig9765.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=81bp
QPPVRRDYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVLEHMAMQAVVN
GFIMLEKWRAMTIAKVDERIAYMLSQKKNIG
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