prot_A-nodosum_M_contig976.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig976.14.1
Unique Nameprot_A-nodosum_M_contig976.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length63
Homology
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BLAST of mRNA_A-nodosum_M_contig976.14.1 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 8.710e-8
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0 
Query:    2 DGSDTSVKYIAHGSLPEGILEITTPNRILADVE----NANKNGSGDG--PSDTTVLAVAKTTA 58
            DGS + + YI+HGSLP+GI E TTPNRILADV     N  + GS DG  P +  +L  A+  A
Sbjct:  381 DGSASEITYISHGSLPDGIPETTTPNRILADVNTRTNNLREGGSVDGATPDERALLGAAQAIA 443
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BLAST of mRNA_A-nodosum_M_contig976.14.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.470e-6
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:    2 DGSDTSVKYIAHGSLPEGILEITTPNRILADVE----NANKNGSGDG--PSDTTVLAVAKTTA 58
            DG  + + YI+HGSLP+GI EITTP+RILADV     N  + G  DG  P +  +L  A+  A
Sbjct:  882 DGDASEITYISHGSLPDGIPEITTPHRILADVNTRTNNLREGGRVDGTTPDERALLGAAQAIA 944
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig976.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ29_ECTSI8.710e-850.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK41_9PHAE1.470e-647.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig976contigA-nodosum_M_contig976:208336..208524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig976.14.1mRNA_A-nodosum_M_contig976.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig976 208334..208524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig976.14.1 ID=prot_A-nodosum_M_contig976.14.1|Name=mRNA_A-nodosum_M_contig976.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=63bp
RDGSDTSVKYIAHGSLPEGILEITTPNRILADVENANKNGSGDGPSDTTV
LAVAKTTANTPGH
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