prot_A-nodosum_M_contig975.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig975.5.1
Unique Nameprot_A-nodosum_M_contig975.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length503
Homology
BLAST of mRNA_A-nodosum_M_contig975.5.1 vs. uniprot
Match: A0A6H5JXW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW6_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 3.560e-23
Identity = 58/104 (55.77%), Postives = 67/104 (64.42%), Query Frame = 0
Query:   21 NPLLDDDDILLHLIPFVAP-EGYLYVAGVTKCWQEAW--GMRPKLTTISNAVESASRLEWAKEQQG------------WRWDASICRRSASSGHLGALRYARAQ 109
            NPL+D+DDIL HLIPFVA  EGYL+VAGV   W  AW  G  PK T + N VESASRL WA  +              W WD S+CRR+A+ GHLGAL+YAR Q
Sbjct:   35 NPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYRAWVGGQLPKNTCLGNVVESASRLAWASSRLSTGGSTSGGASTPWVWDESVCRRAAAGGHLGALKYARKQ 138          
BLAST of mRNA_A-nodosum_M_contig975.5.1 vs. uniprot
Match: D7FVI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI4_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 4.130e-23
Identity = 59/108 (54.63%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   21 NPLLDDDDILLHLIPFVAP-EGYLYVAGVTKCWQEAW--GMRPKLTTISNAVESASRLEWAKEQQG----------------WRWDASICRRSASSGHLGALRYARAQ 109
            NPL+D+DDIL HLIPFVA  EGYL+VAGV   W +AW  G  PK T + N VESASRL WA  + G                W WD S+CRR+A+ GHLGAL+YAR Q
Sbjct:   33 NPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRLGTGGXXXXXXXXXASTPWVWDESVCRRAAAGGHLGALKYARKQ 140          
BLAST of mRNA_A-nodosum_M_contig975.5.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 9.860e-16
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   21 NPLLDDDDILLHLIPFVAPEGYLYVAGVTKCWQEAWGM-RPKLTTISNAVESASRLEWAKEQQGWRWDASICRRSASSGHLGALRYARA 108
            NPL D   IL HLI F A  G+L+VAGV++ W++AWG+ RP  T +  AV+S SRL WA+   G  W  S+C R+AS GHL  LRYARA
Sbjct:  726 NPLADPT-ILRHLISFAARNGFLFVAGVSRSWRDAWGVERPPETEVDAAVQSPSRLGWARAS-GLGWGPSVCARAASGGHLATLRYARA 812          
BLAST of mRNA_A-nodosum_M_contig975.5.1 vs. uniprot
Match: A0A6H5JM75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM75_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 4.150e-5
Identity = 35/116 (30.17%), Postives = 53/116 (45.69%), Query Frame = 0
Query:   20 PNPLLDDDDILLHLIPFVAPEGYLYVAGVTKCWQEAWGMRPKLT------------------------TISNAVESASRLEW---AKEQQGWRWDASICRRSASSGHLGALRYARA 108
            PNPL+  D I+  L+ FV  E Y++ AGV++ W++AW  RP  T                        T+   + +  RL+    A+EQ    WD   C  ++ +GH   LR+A A
Sbjct:    2 PNPLMQPD-IVFRLMEFVGGEQYIFFAGVSRTWRDAWEGRPTTTRAFTADTGVPQLSQSFKCGLAPRSTVCRDIAALGRLDLLVSAREQHECPWDEETCSCASENGHADVLRWAFA 116          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig975.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JXW6_9PHAE3.560e-2355.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVI4_ECTSI4.130e-2354.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXW1_9PHAE9.860e-1653.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JM75_9PHAE4.150e-530.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 81..457
e-value: 1.4E-21
score: 78.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 94..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..502
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 75..250
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 255..454
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 255..454
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 193..396
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 193..396
coord: 75..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig975contigA-nodosum_M_contig975:35776..73548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig975.5.1mRNA_A-nodosum_M_contig975.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig975 35016..73794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig975.5.1 ID=prot_A-nodosum_M_contig975.5.1|Name=mRNA_A-nodosum_M_contig975.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=503bp
MSMRSGQSPDLVAGAGSTSPNPLLDDDDILLHLIPFVAPEGYLYVAGVTK
CWQEAWGMRPKLTTISNAVESASRLEWAKEQQGWRWDASICRRSASSGHL
GALRYARAQGCPWNEQTCTEAASAGHLSILRWARANGCPWDASTCAAAAG
RGHLDMLRFARREGCPWDKETCTEAAGAGELTVLQWARANGCEWNADTCK
YAARSGHLDVLQWARSRGCPWDEKTCSWAAGGGHLQVLRWARANGCPWDK
TTCSAAAREGELEVLQWARSQGCEWDESTCTCAIDEGHLETLQWARAHGC
PWDPDSCRFAAGQGHMEVLEWCKANGGRLDARTCINAAGEGHLEASGWMR
REGELEWARANGCAWDEEVFAMAASGGHLDVIEYCWSNRCPWNEFTCKLA
AEGGHLEVLMWCRARACPWDEDVCAFAAAEGHIELLKWAVENGCPWDKRV
RDYMPGGSRAVFALPQGVSQDSASTSSDDGNGRDEEVAPQTTLERDAGSP
IC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf