prot_A-nodosum_M_contig974.25.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig974.25.1
Unique Nameprot_A-nodosum_M_contig974.25.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length297
Homology
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BLAST of mRNA_A-nodosum_M_contig974.25.1 vs. uniprot
Match: A0A6H5KG63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG63_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 1.020e-87
Identity = 146/266 (54.89%), Postives = 187/266 (70.30%), Query Frame = 0 
Query:   32 FVP----GGAGINP-AGSIACRSFTSQCGRFQAEPRLQKQATGPGTNTVMATSLAPS-KSKADKKAEHFKLWQQSKVVEFGSSQQVETPMPGASLASTKEYISDPSRIVHACWDHDSITPMGNGIFRMGLKGQRFLTISIDMSVDIKFWAGPNGSVQCKSVGYSLDDMGKILGQVLPEDFSFELEGELRVEETETKVRGLALKNALLSGDVGLTIGGKMPGLLAATPERLVRTACLGINNRMLGFVVRKFVDTVAGDYRQWARNLK 291
            FVP    GG G+ P A S  CR            P  +++         MA+S+AP+ ++KA+K +E FKL +   +VEFGS Q+VE  + GA L S + YISDPSRIV+ACW+H  IT MG+G+FRM  +GQ FL+ISIDMSVDI+ W   +G++QCKSVGYS+DDM K+LGQ   + F  ELEGELRVEET TKVR L+LKN  L GDV +TIGGKMPGLL+ATPE LV++A LGINN++L +V   FV TVAGDYR+W+R+ +
Sbjct:   22 FVPSNTAGGMGLTPIAASAPCRPAAVSTTESAGHPDHRRRMA-----VTMASSVAPAPRTKAEKTSEQFKL-KDGGIVEFGSGQRVEATISGAPLESMQAYISDPSRIVYACWEHKDITDMGDGVFRMAFRGQSFLSISIDMSVDIQLWTAEDGTIQCKSVGYSVDDMAKLLGQEFVDTFFLELEGELRVEETVTKVRALSLKNTRLGGDVAVTIGGKMPGLLSATPEPLVKSAALGINNKVLEYVSNTFVSTVAGDYREWSRDQR 281
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BLAST of mRNA_A-nodosum_M_contig974.25.1 vs. uniprot
Match: D7FNW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW2_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.450e-85
Identity = 134/218 (61.47%), Postives = 171/218 (78.44%), Query Frame = 0 
Query:   75 VMATSLAPS-KSKADKKAEHFKLWQQSKVVEFGSSQQVETPMPGASLASTKEYISDPSRIVHACWDHDSITPMGNGIFRMGLKGQRFLTISIDMSVDIKFWAGPNGSVQCKSVGYSLDDMGKILGQVLPEDFSFELEGELRVEETETKVRGLALKNALLSGDVGLTIGGKMPGLLAATPERLVRTACLGINNRMLGFVVRKFVDTVAGDYRQWARNLK 291
             MA+S+AP+ ++KA+K +E FKL +   +VEFGS Q+VE  + GA L S  EYIS+PSRIV+ACW+H  I  MG+G+FRM  +GQ FL+ISIDMSVDI+ W   +G++QCKSVGYS+DDM K+LGQ   + F  ELEG+LRVEET TKVR L+LKN  LSGDV +TIGGKMPGLL+ATPE LV++A LGINN++L +V   FV TVAGDYR+W+R+ K
Sbjct:    4 TMASSVAPAPRTKAEKTSEQFKL-KDGGMVEFGSGQRVEASISGAPLESMLEYISEPSRIVYACWEHKDIMDMGDGVFRMAFRGQSFLSISIDMSVDIQLWTAEDGTIQCKSVGYSVDDMAKLLGQEFVDTFFLELEGKLRVEETVTKVRALSLKNTRLSGDVAVTIGGKMPGLLSATPEPLVKSAALGINNKVLEYVSNTFVSTVAGDYRKWSRDQK 220
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig974.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG63_9PHAE1.020e-8754.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNW2_ECTSI1.450e-8561.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018971Protein of unknown function DUF1997PFAMPF09366DUF1997coord: 124..287
e-value: 9.5E-28
score: 97.3
NoneNo IPR availablePANTHERPTHR34133OS07G0633000 PROTEINcoord: 74..293
NoneNo IPR availablePANTHERPTHR34133:SF8OS07G0633000 PROTEINcoord: 74..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig974contigA-nodosum_M_contig974:236626..241030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig974.25.1mRNA_A-nodosum_M_contig974.25.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig974 236393..241075 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig974.25.1 ID=prot_A-nodosum_M_contig974.25.1|Name=mRNA_A-nodosum_M_contig974.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=297bp
MMHSTTKGTRRRAAPVKVFAILIVFSHHAVGFVPGGAGINPAGSIACRSF
TSQCGRFQAEPRLQKQATGPGTNTVMATSLAPSKSKADKKAEHFKLWQQS
KVVEFGSSQQVETPMPGASLASTKEYISDPSRIVHACWDHDSITPMGNGI
FRMGLKGQRFLTISIDMSVDIKFWAGPNGSVQCKSVGYSLDDMGKILGQV
LPEDFSFELEGELRVEETETKVRGLALKNALLSGDVGLTIGGKMPGLLAA
TPERLVRTACLGINNRMLGFVVRKFVDTVAGDYRQWARNLKDKAAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018971DUF1997