prot_A-nodosum_M_contig970.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig970.3.1
Unique Nameprot_A-nodosum_M_contig970.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length64
Homology
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: UPI001AA1A1FE (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1A1FE)

HSP 1 Score: 85.5 bits (210), Expect = 2.610e-19
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRK-RPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TWTL  +H+AKLR+ HH VLLR+IG QR+ R DH   SY +AL IT CESIETT+R RRL
Sbjct:   11 LYGCVTWTLNADHFAKLRSAHHEVLLRVIGFQRRLRTDHTTLSYAKALRITRCESIETTIRKRRL 75          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 6.680e-16
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY +AL+  GC+S+E T+R RRL
Sbjct:  116 LYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRL 179          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5K7C7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7C7_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 7.130e-16
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW+ R++HY  L+T HHR+LLR+IG +RKR  +R  SY +AL+  GC+S+E T+R RRL
Sbjct:  116 LYGCMTWSPRRDHYRLLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRL 179          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5JS19_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS19_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.080e-15
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW  RQ+ Y  LRT+HHR+LLR+IG QR++  +R  SY + L+  GC+S+ETT+R RRL
Sbjct:  325 LYGCMTWAPRQDQYRTLRTIHHRLLLRVIGYQREKGTYRQLSYAQTLKRVGCQSVETTIRQRRL 388          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.140e-15
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY +AL+  GC+S+E T+R RRL
Sbjct:  167 LYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRL 230          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.490e-15
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY +AL+  GC+S+E T+R RRL
Sbjct:  135 LYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRL 198          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.300e-15
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY +AL+  GC+S+E T+R RRL
Sbjct:  418 LYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRL 481          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5KQ91_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ91_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.300e-15
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY +AL+  GC+S+E T+R RRL
Sbjct:  530 LYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRL 593          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5JEX7_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX7_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.310e-15
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY +AL+  GC+S+E T+R RRL
Sbjct:  586 LYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRL 649          
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Match: A0A6H5KX41_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX41_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.320e-15
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    1 MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEITGCESIETTLRTRRL 64
            +YGC TW+ R+ HY  L+T HHR+LLR+IG +RKR  +R  SY +AL+  GC+S+E T+R RRL
Sbjct:  859 LYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRL 922          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig970.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001AA1A1FE2.610e-1964.62hypothetical protein n=1 Tax=Vibrio parahaemolytic... [more]
A0A6H5JLH5_9PHAE6.680e-1654.69Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7C7_9PHAE7.130e-1654.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JS19_9PHAE1.080e-1554.69Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KLX9_9PHAE1.140e-1554.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWS4_9PHAE1.490e-1554.69Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KA81_9PHAE2.300e-1554.69Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ91_9PHAE2.300e-1554.69Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JEX7_9PHAE2.310e-1554.69Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KX41_9PHAE2.320e-1554.69Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig970contigA-nodosum_M_contig970:42557..42748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig970.3.1mRNA_A-nodosum_M_contig970.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig970 42543..42748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig970.3.1 ID=prot_A-nodosum_M_contig970.3.1|Name=mRNA_A-nodosum_M_contig970.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=64bp
MYGCSTWTLRQEHYAKLRTVHHRVLLRIIGAQRKRPDHRMTSYNRALEIT
GCESIETTLRTRRL
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