prot_A-nodosum_M_contig9691.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9691.2.1
Unique Nameprot_A-nodosum_M_contig9691.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length85
Homology
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: D8LQF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF6_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 6.360e-36
Identity = 76/83 (91.57%), Postives = 82/83 (98.80%), Query Frame = 0
Query:    2 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 84
            NLSNA+LASK+EATTD+E+EVEMLLTAGGASEAGLAE EMEEL++KAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK
Sbjct:  384 NLSNAALASKMEATTDMEKEVEMLLTAGGASEAGLAENEMEELKSKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 466          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A7S3H1C8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1C8_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.610e-14
Identity = 37/79 (46.84%), Postives = 65/79 (82.28%), Query Frame = 0
Query:    7 SLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSKA 85
            S+ ++ E TTD+E+E++M+L   GA++   A++E++ELQ +  +++E++E+QAEL+K++ALMFY++ K+H +NKIKSKA
Sbjct:  204 SMLNRFEPTTDMEKEIQMVLVKHGANDQDAAQREVDELQGRNMSLQEIREKQAELAKVKALMFYEQMKRHRLNKIKSKA 282          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A8K1FHZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHZ2_PYTOL)

HSP 1 Score: 73.2 bits (178), Expect = 3.170e-13
Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    2 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 84
            NL+ A LASK  A T LE++VE LL   G S+  +A++E +EL  K  + EEV +RQ ELSKMRALMFY+E+K   + KIKSK
Sbjct:  286 NLTAAGLASKFSAETSLEKDVEALLKTSGLSDRTIAKEEHDELMQKKVSTEEVMQRQKELSKMRALMFYEEQKAKRVKKIKSK 368          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A2D4CIU8_PYTIN (U3 small nucleolar RNA-associated protein, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIU8_PYTIN)

HSP 1 Score: 70.9 bits (172), Expect = 2.050e-12
Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    2 NLSNASLASKLEATTDLEREVEMLLTAGG-ASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 84
            NL++ASLASK  A T +E+ VE LL AGG   +  +A++E +EL  K  + EEV +RQ EL+KMRALMFY+E+K   + KIKSK
Sbjct:  175 NLTSASLASKFSAETSMEKSVEALLKAGGLGDDRAVAKEEHDELVQKKVSTEEVMQRQKELAKMRALMFYEEQKAKRVKKIKSK 258          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A835Z4Q6_9STRA (Small-subunit processome (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.590e-11
Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    3 LSNASLA-SKLEATTDLEREVEMLLTAGGASEA-GLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 84
            LSNA LA SK +    +E E+  +LT  G+++   +AE E + L AK +T EEV  RQAEL +MRAL+FY ERK+H +NKIKSK
Sbjct:   37 LSNADLAISKFKPQDGMEAEIAAMLTGSGSADTKAMAEAEEKSLAAKHFTPEEVASRQAELQRMRALLFYHERKRHQINKIKSK 120          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A1Y1YL80_9FUNG (Small-subunit processome n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YL80_9FUNG)

HSP 1 Score: 66.2 bits (160), Expect = 8.690e-11
Identity = 43/84 (51.19%), Postives = 59/84 (70.24%), Query Frame = 0
Query:    2 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSKA 85
            N++NASLASK EA+ +LE++V+ +L   G  E+ L  KE EEL+    +VEEV+ R+ EL  MR LMF +ERK   ++KIKSKA
Sbjct:  337 NITNASLASKFEASNELEKQVQTVLEESGIKESNL--KEYEELELNKLSVEEVQARRRELRLMRELMFREERKAKRVSKIKSKA 418          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: UPI0007115F7E (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007115F7E)

HSP 1 Score: 64.3 bits (155), Expect = 4.090e-10
Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    7 SLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKS 83
            SLA+K E TT++E+E++++L      E G+ +KE  +L     +V+EV+ R  EL+KM++LMFYQE+K   +NKIKS
Sbjct:   99 SLAAKFEPTTEMEKEIDVILEKSDMKEKGIRDKESRDLAVNKLSVDEVRARNQELAKMKSLMFYQEQKNKRINKIKS 175          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A7S1YUJ8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YUJ8_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.140e-10
Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    4 SNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEME--------ELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 84
            S   L  K   TTD E+E+ M L   G  E  +AEKE E        +L     T+EE K R  EL+K RAL+FY+E+K+HHMNKIKSK
Sbjct:  266 SKEELVGKFVPTTDFEKEIAMALEKAGGDEETMAEKEREALLGIDGDDLGENKITMEEYKRRVGELAKTRALLFYEEQKRHHMNKIKSK 354          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A3R7ALA4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ALA4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.840e-9
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    2 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 84
            NL+ ASL SK      LE +V  LL A G S+  + ++E  EL A   +V+EV+ RQ EL+KMRA+MFYQE+K   + KIKSK
Sbjct:  292 NLTVASLTSKFVPEKPLENDVAALLEASGWSDKTMLKEEAAELAANEVSVDEVRARQGELAKMRAMMFYQEQKNKRIKKIKSK 374          
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: W4HDF6_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDF6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.970e-9
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    2 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 84
            NL+ ASL SK      LE +V  LL A G S+  + ++E  EL A   +V+EV+ RQ EL+KMRA+MFYQE+K   + KIKSK
Sbjct:  292 NLTVASLTSKFVPEKPLENDVAALLEASGWSDKTMLKEEAAELAANEVSVDEVRARQGELAKMRAMMFYQEQKNKRIKKIKSK 374          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQF6_ECTSI6.360e-3691.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3H1C8_9STRA2.610e-1446.84Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8K1FHZ2_PYTOL3.170e-1354.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CIU8_PYTIN2.050e-1253.57U3 small nucleolar RNA-associated protein, putativ... [more]
A0A835Z4Q6_9STRA4.590e-1152.38Small-subunit processome (Fragment) n=1 Tax=Tribon... [more]
A0A1Y1YL80_9FUNG8.690e-1151.19Small-subunit processome n=1 Tax=Basidiobolus meri... [more]
UPI0007115F7E4.090e-1045.45hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A7S1YUJ8_9STRA4.140e-1047.19Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A3R7ALA4_9STRA1.840e-949.40Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4HDF6_9STRA1.970e-949.40Uncharacterized protein n=11 Tax=Aphanomyces astac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04615Utp14coord: 4..85
e-value: 1.6E-20
score: 73.3
NoneNo IPR availablePANTHERPTHR14150:SF12U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 HOMOLOG A-RELATEDcoord: 5..85
IPR006709Small-subunit processome, Utp14PANTHERPTHR14150U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14coord: 5..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9691contigA-nodosum_M_contig9691:17228..18383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9691.2.1mRNA_A-nodosum_M_contig9691.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9691 17228..18389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9691.2.1 ID=prot_A-nodosum_M_contig9691.2.1|Name=mRNA_A-nodosum_M_contig9691.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=85bp
MNLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYT
VEEVKERQAELSKMRALMFYQERKQHHMNKIKSKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006709SSU_processome_Utp14