mRNA_A-nodosum_M_contig9691.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: D8LQF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF6_ECTSI) HSP 1 Score: 140 bits (352), Expect = 1.070e-36 Identity = 77/86 (89.53%), Postives = 84/86 (97.67%), Query Frame = 1
Query: 1 VRMNLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 258
V+ NLSNA+LASK+EATTD+E+EVEMLLTAGGASEAGLAE EMEEL++KAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK
Sbjct: 381 VKTNLSNAALASKMEATTDMEKEVEMLLTAGGASEAGLAENEMEELKSKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 466
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A7S3H1C8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1C8_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.830e-14 Identity = 37/79 (46.84%), Postives = 65/79 (82.28%), Query Frame = 1
Query: 25 SLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSKA 261
S+ ++ E TTD+E+E++M+L GA++ A++E++ELQ + +++E++E+QAEL+K++ALMFY++ K+H +NKIKSKA
Sbjct: 204 SMLNRFEPTTDMEKEIQMVLVKHGANDQDAAQREVDELQGRNMSLQEIREKQAELAKVKALMFYEQMKRHRLNKIKSKA 282
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A8K1FHZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHZ2_PYTOL) HSP 1 Score: 73.6 bits (179), Expect = 2.510e-13 Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 10 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 258
NL+ A LASK A T LE++VE LL G S+ +A++E +EL K + EEV +RQ ELSKMRALMFY+E+K + KIKSK
Sbjct: 286 NLTAAGLASKFSAETSLEKDVEALLKTSGLSDRTIAKEEHDELMQKKVSTEEVMQRQKELSKMRALMFYEEQKAKRVKKIKSK 368
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A2D4CIU8_PYTIN (U3 small nucleolar RNA-associated protein, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIU8_PYTIN) HSP 1 Score: 71.2 bits (173), Expect = 1.620e-12 Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 10 NLSNASLASKLEATTDLEREVEMLLTAGG-ASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 258
NL++ASLASK A T +E+ VE LL AGG + +A++E +EL K + EEV +RQ EL+KMRALMFY+E+K + KIKSK
Sbjct: 175 NLTSASLASKFSAETSMEKSVEALLKAGGLGDDRAVAKEEHDELVQKKVSTEEVMQRQKELAKMRALMFYEEQKAKRVKKIKSK 258
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A835Z4Q6_9STRA (Small-subunit processome (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.630e-11 Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 13 LSNASLA-SKLEATTDLEREVEMLLTAGGASEA-GLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 258
LSNA LA SK + +E E+ +LT G+++ +AE E + L AK +T EEV RQAEL +MRAL+FY ERK+H +NKIKSK
Sbjct: 37 LSNADLAISKFKPQDGMEAEIAAMLTGSGSADTKAMAEAEEKSLAAKHFTPEEVASRQAELQRMRALLFYHERKRHQINKIKSK 120
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A1Y1YL80_9FUNG (Small-subunit processome n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YL80_9FUNG) HSP 1 Score: 66.6 bits (161), Expect = 6.880e-11 Identity = 43/84 (51.19%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 10 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSKA 261
N++NASLASK EA+ +LE++V+ +L G E+ L KE EEL+ +VEEV+ R+ EL MR LMF +ERK ++KIKSKA
Sbjct: 337 NITNASLASKFEASNELEKQVQTVLEESGIKESNL--KEYEELELNKLSVEEVQARRRELRLMRELMFREERKAKRVSKIKSKA 418
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: UPI0007115F7E (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007115F7E) HSP 1 Score: 64.7 bits (156), Expect = 3.240e-10 Identity = 35/81 (43.21%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 13 LSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKS 255
+++ SLA+K E TT++E+E++++L E G+ +KE +L +V+EV+ R EL+KM++LMFYQE+K +NKIKS
Sbjct: 95 VTSNSLAAKFEPTTEMEKEIDVILEKSDMKEKGIRDKESRDLAVNKLSVDEVRARNQELAKMKSLMFYQEQKNKRINKIKS 175
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A7S1YUJ8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YUJ8_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.280e-10 Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 16 SNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEME--------ELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 258
S L K TTD E+E+ M L G E +AEKE E +L T+EE K R EL+K RAL+FY+E+K+HHMNKIKSK
Sbjct: 266 SKEELVGKFVPTTDFEKEIAMALEKAGGDEETMAEKEREALLGIDGDDLGENKITMEEYKRRVGELAKTRALLFYEEQKRHHMNKIKSK 354
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: A0A3R7ALA4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ALA4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.450e-9 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 10 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 258
NL+ ASL SK LE +V LL A G S+ + ++E EL A +V+EV+ RQ EL+KMRA+MFYQE+K + KIKSK
Sbjct: 292 NLTVASLTSKFVPEKPLENDVAALLEASGWSDKTMLKEEAAELAANEVSVDEVRARQGELAKMRAMMFYQEQKNKRIKKIKSK 374
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Match: W4HDF6_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDF6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.560e-9 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 10 NLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTVEEVKERQAELSKMRALMFYQERKQHHMNKIKSK 258
NL+ ASL SK LE +V LL A G S+ + ++E EL A +V+EV+ RQ EL+KMRA+MFYQE+K + KIKSK
Sbjct: 292 NLTVASLTSKFVPEKPLENDVAALLEASGWSDKTMLKEEAAELAANEVSVDEVRARQGELAKMRAMMFYQEQKNKRIKKIKSK 374 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9691.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9691.2.1 >prot_A-nodosum_M_contig9691.2.1 ID=prot_A-nodosum_M_contig9691.2.1|Name=mRNA_A-nodosum_M_contig9691.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=85bp MNLSNASLASKLEATTDLEREVEMLLTAGGASEAGLAEKEMEELQAKAYTback to top mRNA from alignment at A-nodosum_M_contig9691:17228..18389- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9691.2.1 ID=mRNA_A-nodosum_M_contig9691.2.1|Name=mRNA_A-nodosum_M_contig9691.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1162bp|location=Sequence derived from alignment at A-nodosum_M_contig9691:17228..18389- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9691:17228..18389- >mRNA_A-nodosum_M_contig9691.2.1 ID=mRNA_A-nodosum_M_contig9691.2.1|Name=mRNA_A-nodosum_M_contig9691.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=255bp|location=Sequence derived from alignment at A-nodosum_M_contig9691:17228..18389- (Ascophyllum nodosum dioecious)back to top |