prot_A-nodosum_M_contig968.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig968.5.1
Unique Nameprot_A-nodosum_M_contig968.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length352
Homology
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 4.820e-78
Identity = 192/382 (50.26%), Postives = 214/382 (56.02%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGAGAGXXXXXXXXXXXXXXXXXXXXXXXR----------------------------------------------------HPLEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAGATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSAS-ECVLRRFKVAYFEVGAEKETVVSGVQAPALRIPAGEGGAWPPPLEPEAPLPXXXXXXXADENTGLGGWQTVSVRLVDEAAEAETRRLKKEAK 329
            MASYWVSQERYFCKYCKVWLS HQASIRNHDQGKKH  IV EFFRKKREDKLKGA SESDLKRQM++IEKAA  A +KD  +FGGAGAG          XXXXXXXXXXXXX                                                      P  G+ +  + +         GR    EG       AA            G +EEGGQWYL GQ          IH+ KLAVD+ CQ ++ SEG WVDA+VLA   S         A   SA      RR  +AYFE GAEKETV+ GV+A A+R+PAGEGGAWP P E    +P XXXX   DENTGLGGWQTVSVR+VD AAEAE RR+KKE K
Sbjct:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGSGLGAGSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDXXXXXXXXGSXXXRXXXXXXXXXXXXXXXXRPASGNPSVRAGDVKSEEGAAAGR----EGXXXXXXXAA----------WDGVFEEGGQWYLDGQ----------IHRDKLAVDAACQYFLNSEGLWVDAVVLALADSEQPPHDATAAGDASAGIMATTRRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPAPRE----MPPXXXX---DENTGLGGWQTVSVRMVDVAAEAEARRVKKEVK 351          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.780e-21
Identity = 126/391 (32.23%), Postives = 177/391 (45.27%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGA---------GAGXXXXXXXXXXXXXXXXXXXXXXXRHP-------LEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAGATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKV------------------AYFEVGAEKETVVSGVQAPALRIPAGE---GGAWPPPLEPEAPLPXXXXXXXADENTGLGGWQTVSVRLVDEAAE---------AETRRLKKEAKKERKRAXXDXXEREKA 345
            MA YW S  ++ CK+C VW+  ++ S R H+ G +H+  VEEFF+ +RE K +G+  + +L +++ +IEKAA    +KD  +F  +            XXX          XXXXXXXX  RHP       + GD   + +          G      GS              A A V+G +   G  YL G+A E           +L   +PCQ++V  +  W +AIV   +V+          +VP+ S   LR+F V                  A  +   E + V  GV +  +R+  GE   GG           LP XXXXXX DE+TGLGGWQTVSVR+VDE AE         AE++R K+E  + R R   +  E E A
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFKTSVVTTVEXXXXXXXXXRPPTFSLSSRXXXXXXXXGVRHPXXXXPHRVRGDVGGWRDVEKEEKEVNGGSEDVTGGS--------------AAAEVEGRYTVDGVTYLEGKAVE----------TRLVRGTPCQVWVEKDDAWREAIVSRVEVT----------AVPNTS-LTLRKFSVILGARRPDGGKEAKEGQAAVTQREEEAKEVEEGVLSDRIRLVEGEHSMGGV--------DTLPPXXXXXXVDEDTGLGGWQTVSVRMVDEEAERKASEAAVRAESKRRKEEDAQRRARMLAEAMEGEDA 348          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: M4BW33_HYAAE (Matrin-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW33_HYAAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.730e-13
Identity = 95/365 (26.03%), Postives = 141/365 (38.63%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQ---ELFGGAGAGXXXXXXXXXXXXXXXXXXXXXXXRHPLEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAGATV-----------QGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKVAYFEVGAE---------KETVVSGVQAPALRI--PAG---------------EGGAWPPPLEPEAPLPXXXXXXXADENTGLGGWQTVSVRLVDEAAEAETRRLK 325
            M  YWVS+ER+ CKYC VW+   + SI++H+QG+KH+  VEE  +  R  K    +++ +++ Q+ QIE+AA    ++D                                     H  EGDA + +                +E     AR A   + +     V           +G +   G  YL G+           H+ +L   S CQ++V  + QW+DA+V  A V           ++P+ +E   RRF +AY    ++         K      V A  LRI  PA                 G A  P   P             DE TG+G W TV VR +DE+ EA  +R K
Sbjct:    1 MVDYWVSRERHCCKYCNVWMPSDKTSIKHHEQGRKHKEKVEEVLKLNRRIKSDTKNAQKEIQNQLQQIEEAAHAKFEQDLVRCNTKAQVSISGETVAPPPPPRRPTQIQAVFCSVGHRNEGDAVSVAR---------------LEHRQPWAREALNRSNLNENEEVNEEEGVEEQDDKGVYAVKGIVYLEGKN----------HETQLDTGSACQIWVEEQEQWLDALVEQATVH----------TIPN-TELSFRRFTIAYMSPSSQECAKNKDKRKPVTEHNVLADRLRILLPANVTLEAAEKMVERWRNHGAAESPTRTPVV----------IDETTGMGEWNTVEVRQIDESLEAVAQREK 319          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.260e-11
Identity = 84/332 (25.30%), Postives = 128/332 (38.55%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGAGAGXXXXXXXXXXXXXXXXXXXXXXXRHPLEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAGATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKVAYFEVGAEKETVVSGVQAPALRI--PAGE--------------GGAWPPPLEPEAPLPXXXXXXXADENTGLGGWQTVSVRLVDEA 316
            M  YW S ERYFCKYC +WL     S+R+H++ K+H   ++E  + KR+ K+K    + DLK+Q+D+IE+ A     +D +                               R P       +S+            P   E      ++              G +    Q +L G+           H+ ++   S CQ++V    +W DA+V AA           R SVP+ S   LR +++ Y +    +      V A  LRI  PAG               GGA     E   P+         DE+TG+G W TV VR + ++
Sbjct:    1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAEDMK--------------GKSSKYANNKAFTSKPFRRPK---TKTFSDGTSSWPLYPVAVPEEKEPVDERKKD------------DLGVYSVRDQVFLDGKC----------HEGQIFAQSACQIWVEELEEWRDALVDAAV----------RHSVPNTS-LSLRHYQITYMDPSQNQVITEKEVTADRLRILLPAGTTLEEAEEMIRKAGCGGASDT-TESHGPV---------DESTGMGEWSTVLVREIPDS 272          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A024GJW7_9STRA (Matrin-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJW7_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.120e-11
Identity = 86/324 (26.54%), Postives = 127/324 (39.20%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGAGAGXXXXXXXXXXXXXXXXXXXXXXXRHPLEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAG--ATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKVAYFEVGAEKETVVSGVQAPALRIPAGEGGAWPPPLEPEAPLPXXXXXXXADEN---------TGLGGWQTVSVRLV 313
            M  YW S ER+FCK+C +WL     SIR+H++ ++H   V+E  + KR+ K++    E DLK+Q+D+IE+AA     +D +                                 P   D N+ S            RP     S G +      A V     A  +G  ++ G + +  Q     ++    H+ +L   S CQ++V S  +W D +V AA           R SVP+ S   LR +++ Y      K      V A  LRI    G       E E  +         D N         TG+G W TV VR +
Sbjct:    1 MTEYWKSNERHFCKFCDIWLQGDTISIRHHEKSRRHLDRVQEKLKTKRQAKVRSERDEKDLKKQLDEIERAAHARFAEDMKA-----------------------------KSTPCSSDKNSTSRPFFR-------RPKTKTCSDGTSSWPLYPAVVPKEIEAVDEGNADDLGVYSVRDQVFLDAKY----HEGQLVAQSACQIWVESLEEWRDGLVDAAV----------RRSVPNTSVS-LRHYQITYMNPSESKPITEKEVTADRLRILLPSGTTL---EEAEEMIQKTRNGDRIDTNEYHGPVDGSTGMGEWSTVLVREI 270          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A812E5P2_SEPPH (WBP4 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812E5P2_SEPPH)

HSP 1 Score: 71.2 bits (173), Expect = 3.630e-10
Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKD 79
            MA YW SQ R FC++CK WL+ ++ SI  H++GK+HQ  V++     ++  L  A  +S+++  M+Q+ KAAL+A KKD
Sbjct:    4 MADYWKSQPRKFCEFCKCWLTDNKPSIEFHEKGKRHQENVKKKIETIKKKSLADAQKKSEMESDMEQLNKAALEAFKKD 82          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A2C9L3S8_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L3S8_BIOGL)

HSP 1 Score: 70.5 bits (171), Expect = 5.050e-10
Identity = 33/79 (41.77%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKD 79
            M+ YW S  R FC +CK W++ ++ S+  H++GK+HQ  VE   ++ R+  L+ ++ +  LK+ MD++EKAAL+A KKD
Sbjct:    1 MSEYWKSVPRKFCDFCKCWITDNKPSVDFHERGKRHQENVELRLKEVRKKSLQKSADDEQLKKDMDKMEKAALEAFKKD 79          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM)

HSP 1 Score: 69.3 bits (168), Expect = 5.720e-10
Identity = 31/79 (39.24%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKD 79
            M+ YWVSQ++++C+YC+++++ ++ S   H+QGKKH+  VE+F R  R    +    E   KR++++IE+AA++  KKD
Sbjct:    1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKD 79          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A7S1GZF4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GZF4_HEMAN)

HSP 1 Score: 66.6 bits (161), Expect = 5.750e-10
Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQE 81
            M  YWVSQ RY+CK+C+ WLS  +A+   HD G +H+  VE++ +  R+ K +   +  D +++M  I++AA +  K D E
Sbjct:   26 MTEYWVSQARYWCKFCQCWLSDTKAARSKHDNGNRHKQSVEDWMKDNRKRKREERIANEDFEKEMRDIDRAAREQFKADVE 106          
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: UPI0003598268 (WW domain-binding protein 4 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003598268)

HSP 1 Score: 68.6 bits (166), Expect = 2.040e-9
Identity = 30/79 (37.97%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKD 79
            M+ YW S  R FC++CK W++ ++ S+  H++GK+HQ  V+   ++ R+  LK ++ + ++ + M+++EKAAL+A KKD
Sbjct:    1 MSEYWKSVPRKFCEFCKCWITDNKPSVEFHERGKRHQENVQLRLKEVRKKSLKDSAEQEEMDKAMEKMEKAALEAFKKD 79          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI0_9PHAE4.820e-7850.26Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A4D9CZ19_9STRA3.780e-2132.23U1-type domain-containing protein n=2 Tax=Monodops... [more]
M4BW33_HYAAE1.730e-1326.03Matrin-type domain-containing protein n=1 Tax=Hyal... [more]
F0WHY0_9STRA1.260e-1125.30Uncharacterized protein AlNc14C105G6187 n=1 Tax=Al... [more]
A0A024GJW7_9STRA3.120e-1126.54Matrin-type domain-containing protein n=1 Tax=Albu... [more]
A0A812E5P2_SEPPH3.630e-1043.04WBP4 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0... [more]
A0A2C9L3S8_BIOGL5.050e-1041.77Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A397TAV1_9GLOM5.720e-1039.24Matrin-type domain-containing protein n=1 Tax=Glom... [more]
A0A7S1GZF4_HEMAN5.750e-1038.27Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
UPI00035982682.040e-937.97WW domain-binding protein 4 n=1 Tax=Aplysia califo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 314..348
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 9..59
e-value: 2.7E-8
score: 35.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..298
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 8..43
e-value: 4.3E-6
score: 36.2
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 9..43
e-value: 5.8E-10
score: 38.8
IPR040023WW domain-binding protein 4PANTHERPTHR13173WW DOMAIN BINDING PROTEIN 4coord: 1..104
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 11..42
score: 9.357525
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 9..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig968contigA-nodosum_M_contig968:110583..117091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig968.5.1mRNA_A-nodosum_M_contig968.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig968 110583..117705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig968.5.1 ID=prot_A-nodosum_M_contig968.5.1|Name=mRNA_A-nodosum_M_contig968.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=352bp
MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKRED
KLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGAGAGSAPPPPPPPPP
PSDDIPPPPPPPRHPLEGDANAYSEEPPPPPPPPPGRPPGIEGSFGAARN
AAPNAGVGAGATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPC
QMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKVAYFE
VGAEKETVVSGVQAPALRIPAGEGGAWPPPLEPEAPLPPPPPPPPADENT
GLGGWQTVSVRLVDEAAEAETRRLKKEAKKERKRAREDKSEREKARCQKG
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR013085U1-CZ_Znf_C2H2
IPR040023WBP4
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf