mRNA_A-nodosum_M_contig968.5.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig968.5.1
Unique NamemRNA_A-nodosum_M_contig968.5.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.960e-75
Identity = 192/382 (50.26%), Postives = 214/382 (56.02%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGAGAGXXXXXXXXXXXXXXXXXXXXXXXR----------------------------------------------------HPLEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAGATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSAS-ECVLRRFKVAYFEVGAEKETVVSGVQAPALRIPAGEGGAWPPPLEPEAPLPXXXXXXXADENTGLGGWQTVSVRLVDEAAEAETRRLKKEAK 987
            MASYWVSQERYFCKYCKVWLS HQASIRNHDQGKKH  IV EFFRKKREDKLKGA SESDLKRQM++IEKAA  A +KD  +FGGAGAG          XXXXXXXXXXXXX                                                      P  G+ +  + +         GR    EG       AA            G +EEGGQWYL GQ          IH+ KLAVD+ CQ ++ SEG WVDA+VLA   S         A   SA      RR  +AYFE GAEKETV+ GV+A A+R+PAGEGGAWP P E    +P XXXX   DENTGLGGWQTVSVR+VD AAEAE RR+KKE K
Sbjct:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGSGLGAGSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDXXXXXXXXGSXXXRXXXXXXXXXXXXXXXXRPASGNPSVRAGDVKSEEGAAAGR----EGXXXXXXXAA----------WDGVFEEGGQWYLDGQ----------IHRDKLAVDAACQYFLNSEGLWVDAVVLALADSEQPPHDATAAGDASAGIMATTRRLDLAYFEAGAEKETVLRGVEAAAVRLPAGEGGAWPAPRE----MPPXXXX---DENTGLGGWQTVSVRMVDVAAEAEARRVKKEVK 351
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A4D9CZ19_9STRA (U1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ19_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.260e-20
Identity = 123/380 (32.37%), Postives = 173/380 (45.53%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGA---------GAGXXXXXXXXXXXXXXXXXXXXXXXRHP-------LEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAGATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKV------------------AYFEVGAEKETVVSGVQAPALRIPAGE---GGAWPPPLEPEAPLPXXXXXXXADENTGLGGWQTVSVRLVDEAAE---------AETRRLKKEAKKERKR 1002
            MA YW S  ++ CK+C VW+  ++ S R H+ G +H+  VEEFF+ +RE K +G+  + +L +++ +IEKAA    +KD  +F  +            XXX          XXXXXXXX  RHP       + GD   + +          G      GS              A A V+G +   G  YL G+A E           +L   +PCQ++V  +  W +AIV   +V+          +VP+ S   LR+F V                  A  +   E + V  GV +  +R+  GE   GG           LP XXXXXX DE+TGLGGWQTVSVR+VDE AE         AE++R K+E  + R R
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFKTSVVTTVEXXXXXXXXXRPPTFSLSSRXXXXXXXXGVRHPXXXXPHRVRGDVGGWRDVEKEEKEVNGGSEDVTGGS--------------AAAEVEGRYTVDGVTYLEGKAVE----------TRLVRGTPCQVWVEKDDAWREAIVSRVEVT----------AVPNTS-LTLRKFSVILGARRPDGGKEAKEGQAAVTQREEEAKEVEEGVLSDRIRLVEGEHSMGGV--------DTLPPXXXXXXVDEDTGLGGWQTVSVRMVDEEAERKASEAAVRAESKRRKEEDAQRRAR 337
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: M4BW33_HYAAE (Matrin-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW33_HYAAE)

HSP 1 Score: 81.3 bits (199), Expect = 8.800e-13
Identity = 95/365 (26.03%), Postives = 141/365 (38.63%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQ---ELFGGAGAGXXXXXXXXXXXXXXXXXXXXXXXRHPLEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAGATV-----------QGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKVAYFEVGAE---------KETVVSGVQAPALRI--PAG---------------EGGAWPPPLEPEAPLPXXXXXXXADENTGLGGWQTVSVRLVDEAAEAETRRLK 975
            M  YWVS+ER+ CKYC VW+   + SI++H+QG+KH+  VEE  +  R  K    +++ +++ Q+ QIE+AA    ++D                                     H  EGDA + +                +E     AR A   + +     V           +G +   G  YL G+           H+ +L   S CQ++V  + QW+DA+V  A V           ++P+ +E   RRF +AY    ++         K      V A  LRI  PA                 G A  P   P             DE TG+G W TV VR +DE+ EA  +R K
Sbjct:    1 MVDYWVSRERHCCKYCNVWMPSDKTSIKHHEQGRKHKEKVEEVLKLNRRIKSDTKNAQKEIQNQLQQIEEAAHAKFEQDLVRCNTKAQVSISGETVAPPPPPRRPTQIQAVFCSVGHRNEGDAVSVAR---------------LEHRQPWAREALNRSNLNENEEVNEEEGVEEQDDKGVYAVKGIVYLEGKN----------HETQLDTGSACQIWVEEQEQWLDALVEQATVH----------TIPN-TELSFRRFTIAYMSPSSQECAKNKDKRKPVTEHNVLADRLRILLPANVTLEAAEKMVERWRNHGAAESPTRTPVV----------IDETTGMGEWNTVEVRQIDESLEAVAQREK 319
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.940e-11
Identity = 84/332 (25.30%), Postives = 128/332 (38.55%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGAGAGXXXXXXXXXXXXXXXXXXXXXXXRHPLEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAGATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKVAYFEVGAEKETVVSGVQAPALRI--PAGE--------------GGAWPPPLEPEAPLPXXXXXXXADENTGLGGWQTVSVRLVDEA 948
            M  YW S ERYFCKYC +WL     S+R+H++ K+H   ++E  + KR+ K+K    + DLK+Q+D+IE+ A     +D +                               R P       +S+            P   E      ++              G +    Q +L G+           H+ ++   S CQ++V    +W DA+V AA           R SVP+ S   LR +++ Y +    +      V A  LRI  PAG               GGA     E   P+         DE+TG+G W TV VR + ++
Sbjct:    1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAEDMK--------------GKSSKYANNKAFTSKPFRRPK---TKTFSDGTSSWPLYPVAVPEEKEPVDERKKD------------DLGVYSVRDQVFLDGKC----------HEGQIFAQSACQIWVEELEEWRDALVDAAV----------RHSVPNTS-LSLRHYQITYMDPSQNQVITEKEVTADRLRILLPAGTTLEEAEEMIRKAGCGGASDT-TESHGPV---------DESTGMGEWSTVLVREIPDS 272
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A024GJW7_9STRA (Matrin-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJW7_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 9.570e-11
Identity = 86/324 (26.54%), Postives = 127/324 (39.20%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGAGAGXXXXXXXXXXXXXXXXXXXXXXXRHPLEGDANAYSEEXXXXXXXXXGRPPGIEGSFGAARNAAPNAGVGAG--ATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPCQMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKVAYFEVGAEKETVVSGVQAPALRIPAGEGGAWPPPLEPEAPLPXXXXXXXADEN---------TGLGGWQTVSVRLV 939
            M  YW S ER+FCK+C +WL     SIR+H++ ++H   V+E  + KR+ K++    E DLK+Q+D+IE+AA     +D +                                 P   D N+ S            RP     S G +      A V     A  +G  ++ G + +  Q     ++    H+ +L   S CQ++V S  +W D +V AA           R SVP+ S   LR +++ Y      K      V A  LRI    G       E E  +         D N         TG+G W TV VR +
Sbjct:    1 MTEYWKSNERHFCKFCDIWLQGDTISIRHHEKSRRHLDRVQEKLKTKRQAKVRSERDEKDLKKQLDEIERAAHARFAEDMKA-----------------------------KSTPCSSDKNSTSRPFFR-------RPKTKTCSDGTSSWPLYPAVVPKEIEAVDEGNADDLGVYSVRDQVFLDAKY----HEGQLVAQSACQIWVESLEEWRDGLVDAAV----------RRSVPNTSVS-LRHYQITYMNPSESKPITEKEVTADRLRILLPSGTTL---EEAEEMIQKTRNGDRIDTNEYHGPVDGSTGMGEWSTVLVREI 270
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A812E5P2_SEPPH (WBP4 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812E5P2_SEPPH)

HSP 1 Score: 71.2 bits (173), Expect = 9.880e-10
Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKD 237
            MA YW SQ R FC++CK WL+ ++ SI  H++GK+HQ  V++     ++  L  A  +S+++  M+Q+ KAAL+A KKD
Sbjct:    4 MADYWKSQPRKFCEFCKCWLTDNKPSIEFHEKGKRHQENVKKKIETIKKKSLADAQKKSEMESDMEQLNKAALEAFKKD 82
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A7S1GZF4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GZF4_HEMAN)

HSP 1 Score: 66.6 bits (161), Expect = 1.100e-9
Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKDQE 243
            M  YWVSQ RY+CK+C+ WLS  +A+   HD G +H+  VE++ +  R+ K +   +  D +++M  I++AA +  K D E
Sbjct:   26 MTEYWVSQARYWCKFCQCWLSDTKAARSKHDNGNRHKQSVEDWMKDNRKRKREERIANEDFEKEMRDIDRAAREQFKADVE 106
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A2C9L3S8_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L3S8_BIOGL)

HSP 1 Score: 70.5 bits (171), Expect = 1.290e-9
Identity = 33/79 (41.77%), Postives = 54/79 (68.35%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKD 237
            M+ YW S  R FC +CK W++ ++ S+  H++GK+HQ  VE   ++ R+  L+ ++ +  LK+ MD++EKAAL+A KKD
Sbjct:    1 MSEYWKSVPRKFCDFCKCWITDNKPSVDFHERGKRHQENVELRLKEVRKKSLQKSADDEQLKKDMDKMEKAALEAFKKD 79
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM)

HSP 1 Score: 69.3 bits (168), Expect = 1.300e-9
Identity = 31/79 (39.24%), Postives = 55/79 (69.62%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKD 237
            M+ YWVSQ++++C+YC+++++ ++ S   H+QGKKH+  VE+F R  R    +    E   KR++++IE+AA++  KKD
Sbjct:    1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKD 79
[Close]
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Match: UPI0003598268 (WW domain-binding protein 4 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003598268)

HSP 1 Score: 68.6 bits (166), Expect = 4.960e-9
Identity = 30/79 (37.97%), Postives = 55/79 (69.62%), Query Frame = 1 
Query:    1 MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKREDKLKGASSESDLKRQMDQIEKAALQAIKKD 237
            M+ YW S  R FC++CK W++ ++ S+  H++GK+HQ  V+   ++ R+  LK ++ + ++ + M+++EKAAL+A KKD
Sbjct:    1 MSEYWKSVPRKFCEFCKCWITDNKPSVEFHERGKRHQENVQLRLKEVRKKSLKDSAEQEEMDKAMEKMEKAALEAFKKD 79
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig968.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI0_9PHAE1.960e-7550.26Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A4D9CZ19_9STRA4.260e-2032.37U1-type domain-containing protein n=2 Tax=Monodops... [more]
M4BW33_HYAAE8.800e-1326.03Matrin-type domain-containing protein n=1 Tax=Hyal... [more]
F0WHY0_9STRA3.940e-1125.30Uncharacterized protein AlNc14C105G6187 n=1 Tax=Al... [more]
A0A024GJW7_9STRA9.570e-1126.54Matrin-type domain-containing protein n=1 Tax=Albu... [more]
A0A812E5P2_SEPPH9.880e-1043.04WBP4 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0... [more]
A0A7S1GZF4_HEMAN1.100e-938.27Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A2C9L3S8_BIOGL1.290e-941.77Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A397TAV1_9GLOM1.300e-939.24Matrin-type domain-containing protein n=1 Tax=Glom... [more]
UPI00035982684.960e-937.97WW domain-binding protein 4 n=1 Tax=Aplysia califo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig968contigA-nodosum_M_contig968:110583..117705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI35
PFAMszf-U1
Model size1670
Max annot lvl2759|Eukaryota
KEGG rclassRC00001
KEGG koko:K00354,ko:K13220,ko:K21768
KEGG ReactionR00282
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009791,GO:0009845,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015030,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0019222,GO:0031047,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0045292,GO:0046483,GO:0048519,GO:0048856,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071704,GO:0080188,GO:0090304,GO:0090351,GO:0097159,GO:1901360,GO:1901363,GO:1990904
Exons7
Evalue6.05e-83
EggNOG OGsKOG0150@1|root,KOG0150@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, U1-type
Ec32 orthologEc-10_003350.1
EC1.6.99.1
Descriptionzinc ion binding
Cds size1056
COG categoryA
BRITEko00000,ko01000,ko03041,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig968.5.1prot_A-nodosum_M_contig968.5.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig968 110583..117091 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870487.0670578-CDS-A-nodosum_M_contig968:110582..1106571680870487.0670578-CDS-A-nodosum_M_contig968:110582..110657Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig968 110583..110657 +
1680870487.145244-CDS-A-nodosum_M_contig968:113546..1136811680870487.145244-CDS-A-nodosum_M_contig968:113546..113681Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig968 113547..113681 +
1680870487.1586568-CDS-A-nodosum_M_contig968:114196..1144061680870487.1586568-CDS-A-nodosum_M_contig968:114196..114406Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig968 114197..114406 +
1680870487.1729422-CDS-A-nodosum_M_contig968:114583..1147271680870487.1729422-CDS-A-nodosum_M_contig968:114583..114727Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig968 114584..114727 +
1680870487.253415-CDS-A-nodosum_M_contig968:115180..1152671680870487.253415-CDS-A-nodosum_M_contig968:115180..115267Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig968 115181..115267 +
1680870487.270436-CDS-A-nodosum_M_contig968:116043..1163131680870487.270436-CDS-A-nodosum_M_contig968:116043..116313Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig968 116044..116313 +
1680870487.2821171-CDS-A-nodosum_M_contig968:116956..1170911680870487.2821171-CDS-A-nodosum_M_contig968:116956..117091Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig968 116957..117091 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870487.2940094-UTR-A-nodosum_M_contig968:117091..1177051680870487.2940094-UTR-A-nodosum_M_contig968:117091..117705Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig968 117092..117705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig968.5.1

>prot_A-nodosum_M_contig968.5.1 ID=prot_A-nodosum_M_contig968.5.1|Name=mRNA_A-nodosum_M_contig968.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=352bp
MASYWVSQERYFCKYCKVWLSKHQASIRNHDQGKKHQAIVEEFFRKKRED
KLKGASSESDLKRQMDQIEKAALQAIKKDQELFGGAGAGSAPPPPPPPPP
PSDDIPPPPPPPRHPLEGDANAYSEEPPPPPPPPPGRPPGIEGSFGAARN
AAPNAGVGAGATVQGAWEEGGQWYLHGQARERFEFFFYIHQAKLAVDSPC
QMYVTSEGQWVDAIVLAAQVSLLARKICRRASVPSASECVLRRFKVAYFE
VGAEKETVVSGVQAPALRIPAGEGGAWPPPLEPEAPLPPPPPPPPADENT
GLGGWQTVSVRLVDEAAEAETRRLKKEAKKERKRAREDKSEREKARCQKG
R*
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mRNA from alignment at A-nodosum_M_contig968:110583..117705+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig968.5.1 ID=mRNA_A-nodosum_M_contig968.5.1|Name=mRNA_A-nodosum_M_contig968.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7123bp|location=Sequence derived from alignment at A-nodosum_M_contig968:110583..117705+ (Ascophyllum nodosum dioecious)
ATGGCGTCCTACTGGGTATCGCAGGAGCGGTACTTCTGCAAATACTGTAA
GGTCTGGCTTTCCAAGCATCAGGCGGTGAGTATTCTTATCTTTTTGAGTA
GACGAAAGCAGCGAATCAACGGAGTCTTTAAGTAGCCACACGACCTATTC
AACTCTTTTTCTAGGTTTCACTCACTATTCTCAATACCTTCTTCTCAAAA
TAAATAACATCGCTGCACCAGTACAAAATCACGAACTACTGCTGTAATAC
TCCCGACTTCTTGCGAGCGAACCACAGCGGTAATAGAAAGGTGTGCTGTT
CGTGCTTCTTCCGATGGTCTATGGTGAGCAAGCCACACCGTCGAGATGAC
ACCCTAGATTTGGTACGTGACAAGTGACTGATGTAAACCACTTGTTGTGC
AGTACATGTATGTATGTATCTTTATTTATTAAATTGCACATAACACGTCG
TAGCATCCGGCCCGGGGAACCCGTTTGAATGTCATCAAAAATAGTAGTAC
TGGAGTATCAATCTATCTGCTTTGCCACTCGCATTGAATGTATGTATCTA
TGTATCTATGTATGGTCATCACATAAAGTAGCAAGGTTAAGGATCAACCG
GGTAAGGTTGTCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATTGATT
TTTCCCAGTCTCCGGTCGCGCCTGAGAAGTTGGTCTCGCGAGACGGGTTC
GACAGTCCCGTCCCTCATCTCCATGCTCAGGCTGAATCTGGTATATAACG
GCAGGTTTCTCCCTACAACTGTTTTAAGAAAAATCTGAACACATCTTAGC
CTCCTTAGCATCTACCCTCAGGGTGGAAAAGTTGTCAAATGATTTAGGTG
GTATTAGAACATTGGCTGTAAGGACGAAAATTCTTACATATTATCAGTAG
GGTTCCCCAATGTAGTCACATAGGGTCAACAGTATAATATCGAGGAGTTG
CCCCCAAACTACCAATACAGTACTACCATTGGGGAACCCGATTAAATCCC
ATAAGGATTTTTTGTCCCTCCTAGGCGTTTCCACCCCTTTTCCTCCCGAC
GATCTGTATGCTCTTTAATTTACTAACGTTAACGTTCACGTTTTTTCGCG
TTCATTCAGATTTTTACCTCTCACCACTTACTTCCCTCTACTGTACATAC
AAGTAGCTTCGCATCATTAGCACTTACAGTATCCCCGCTTTGTGTAGCAC
CTCAGCGTCACCGTATCTCTTCTTACGAGGGCTATTGTGACCGTACACTC
TGTACACTGCTCCTGTGAAATGCTCCAAAAGGGTACCACCGTATACTGTA
CACGTAGTAGTTGTACTTGTGCTGTAGTACGGACGACGCAGTCGGTAGCT
CTCCTCCAAAACACAGCCCCGTTGTCCTGCCTGTGACTATCATAGAGAGC
TATTAATATTAATAGTTTATCGTCTCAGGGTATACAAAATCGTGTATGTT
TATCGCACCAGAGAAAGCATCTCATCAGACCCCGTCACAGAATCAGCTTT
GTACGGTGTACATGTAGCAGGTGTACTGTAGAAAAACACTCTTCTATTAA
TATGTATCAATAGTTTCTTCGCACATTCAGCATTTTCCGCCGAATTGACT
ACCAGATACATCTCACGATGCGCGAATCGGACTCGATTACCGAGGTTTAT
GCCTGCCAGGGCAAGCGAGGCCCACTGTCAACGGCACGAGTTGCCGACAT
TTCCCCAGCATGTACGATACTTTATGCATCATCGAACATGCCCACTTCAT
ACCATTAGTGGGTGTGGGAAAAGAGAGGCGCACATTAATTGGTCCATGGT
GACCTGCCAAATGGCAGCACCCGTTATTACTGGAACTGCGTTGAGGACTA
GGACTACTGGCCCTGTGCCGGCGGACTCTCGGGAGTGAACACCATCGGTA
CGCAATTGCGTGACCCGATAAACTCTAATAGGGACTGACTCGATGGCGGT
GGGCAGTATAGATAAATAAATGGACGCCGTCCGGGAAATCGGGAGAAATC
CCGCGAGTAAGCATCAGATTTCATACCTGAAACGGCAGCACCCGTTACTG
GAATTACCTTGAGGACTACTCGCCCTGAGCCGGCGGACTCTCGGAAGTGA
ACGCGATCGGTACGAAATTGCGTGACCTGATAAACTCGGTACCCACCCGA
TGGCGATGGACGGTATAAATAAATAGACGCCGCCGGGGAAATCGGGAGGA
ATTCCGCGAGTAAGCACCAGACTCAGCCTGAGTGTGGAGAATGAGCAGGC
TGACAAGGAACGGGACGGTTGAACCCGTCTCGCGAGACCAAATTCTCAGG
CGCGAACGGGGACAGGGAAATATTCGTTCTCCCTATTCAGCTGACCACAA
GCAGGATTGGCAACCTTACCCGGCTGATCATTACCCTTGCTATATGTGAT
GACCATACATGTATACAAGTTCGCAATCTATCCCTACTATAATATTGTAT
GAAGTATACGGCTCACTGGTCGAAGCAGTGCCCGTTGGAAGTTATCCTTC
GCAGTTCAGCAACGTTACCTTTCCGACAATTTCTCGGGCGCGCTTGCCCT
CCTCCACCAGTTCCTGTCTACAGCAATAGAGTTCAAATCCTCTTGGTTTC
TGCGTCGAGGTCTACACATTCCTGGGGGGGGGGGCATGGTCGCGCGGAAG
AGGGCTCTTTCGCCCATGCCTTTGCGTTTCGCTCAAAAcccctccCCCCT
CCCCCCCCCCCCAGCCGCCGTGGCATGCCGTTGCTTGATTGGTTGGTTGG
TGGATCGATTGATTTATGACTACTGTTTGTGGAGACTTTACCGTAGATTG
CACCGTACAGCTCTATAAAAGACAGGTGGTGATTCGCAACGGTCATGTAC
ATTGCAGTCAGACAGAGCGTTGAGCACAGCTGGCGCGAGTCTCAACCCAG
AATCACACCGGTACAAACTGTTTTACACACTGTTTTTTGCACACACCCCA
CGCATGACGCGCAGAGCATCCGGAATCATGACCAAGGGAAGAAACACCAG
GCCATCGTGGAGGAGTTCTTCCGGAAGAAGAGGGAGGACAAGCTCAAGGG
GGCGAGCAGCGAGTCCGACCTCAAGAGGCAGATGGATCAGATCGAGAAGG
TTTGGCGGCGAGGAAGCGGTGCCTCGCTCAAGCACAGAGTGCAGGGCGAC
AGCGTTGGCGCGCTAGGCGCCTGAATGCTAGATCCATTTTTTAATAGCCA
ACAACATATAGACGTTATAGACTTTGAACCGAAGTTTGCGGTAGAGCAGT
CATAGTGTACAGGGGTCGTCGTGTGATGCCCTGACAAGTAAGGTGGTTCA
GCGGTAGATGTAGTGTCGACCAGGGGCGAGCTTCGCAGAGGCGATCGCGT
CATTCAGGTGTCCTCCATCACGTGGTGACGCATTGATTTAGTAATGATCT
ATTAGTATTAGTAATGATCTATTAGTATTAGTATTAGTAATGGCTATTAA
TACTTTCCTTCGCGACCATTCCATGCCTTCCTTCTGCTGTACATTCCCAC
GTACAAACAGTTGCTCCCCCCTTGGGACGCGGGCTCCCTCTCCCCCCCCC
CAAAAAATAAACCCGCTCCAGCTGTCGTCCTAAACCGCCTCTGGATCACT
CCTCGTGCGCACAGGCAGCCCTTCAGGCGATCAAAAAGGACCAAGAGCTG
TTCGGCGGCGCGGGCGCGGGATCAGCCCCTCCCCCTCCCCCTCCCCCGCC
ACCACCATCCGACGATATCCCGCCCCCTCCTCCCCCGCCTCGACACCCAC
TAGAGGGGGACGCAAACGCCTACTCGGAGGAACCTCCCCCTCCACCGCCA
CCCCCCCCGGGGAGGCCTCCAGGGGTGGAAGATGAACCTACACCTCCGCC
GCCGCCGAGACATGTAGCGATGGTGAAGATTGAAGGGTCATTCGGGGCAG
CGAGAAACGCGGCGCCGCCGCCCCCCCCGGGGGGGCCTCCAGGGGTGGAA
GATGAACCTACACCTCCGCCGCCGCCGCCGAGCCATACAGCGATTGTTAA
GATTGAAGGATCATTCGGGGCAGCGAGAAACGCGGCACCGAATGCCGGGG
TTGGAGCTGGAGCCACCGTACAAGGGGCGTGGGAGGAGGGCGGGCAGTGG
TATCTCCACGGGCAGGCGAGGGAAAGATTCGAGTTTTTTTTTTACGTTTG
CGGGAACGGGTGGGGGTAGGGGCGGGGCTTTGCGGGGAAATATAGCTTGG
TGTATCGATAGGAGAAACGATACCAGTACACTGATGCTCGGATTCATATT
CCAAGTCCTCTTGGGAATCTCCCTTGCCTCATTGATCCCCTGCTCCAGTT
GATAGCCTTCCACGCGTGGGACATCAGCGACCAACCCCTGCGCTACTCCT
CCGCTAACGCTGATGCCGATGCTGGTGCTAACGGGCCGTTACACGTCTCC
GAGTTCTTATAATATAAATAGTATTTTTGTAACGCCAAAGACCTTTTAAA
TCACTGATTTCTCCTCCTCCTCTTCGCTTTAGGTGCGCCTCCCCTACAAG
CACTCTACAAGCACTCTAGAGCCTAGATATTTGACCCCCAAGCCCTCATG
CCGATGCGCTTCGCCTCTTCGCCATGGTGTGCTGGTGCTACGATGCAGAT
TCATCAGGCCAAGCTGGCGGTTGATTCCCCTTGCCAGATGTACGTGACTT
CGGAAGGTCAGTGGGTGGACGCGATTGTGCTTGCGGTCGGAGCGGACGAC
GGTGACTGCCGAAGGTGAGCCTTCGAAGTAGATTTTTGTTTTCCTTTTTT
TAGTGCTGCGGTTTGCCGAAGGCGGAGATGGGTGTGTCATGACGCGAGGA
TTATTCCGGTGCTTTATTTTTTCCATAGCCGGCAAGTGTGTGGCAAGTGT
GTGCTGAGAGAGGCGGAAACACGAACGAAACGAAACACACACAAAAACAA
ACTAAACTAACTATATAACTAAAGGACAGACGTGTACCAGACAAAACGCA
CCCAATATCGATCAACCGGCCGTTAGAAACCGTATGTTCATCTTCCCACA
CCCACTGCTCTTCTTCACTCTCATTCATAACTGCTCTTCATCGTTGCCGC
GAAAACAGAGTAGTGGGGGGGGGGATAGTCAACTAGACGACTATCTATCT
ACCCCCGCCGAGCTTATTTTATTTCCTTGTCATGTATGTATGTATGGTCA
TCACATAAAGCAAGGGTAAGGATCAACCGGGTAAGGTTGCCAATCCTGGT
CGTGGTCAGCTGAACAGGGAAAAATGATTTTTTTACCTGTCCCCGTTCGC
GCCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCCGTCCCGTCCCGCGTC
AGCCTGCTCATTCTCCACACTCAGGCTGAACTTGGTGCTTATTTACGGGA
TTCCTCTCGAGTTCCGCGCCATCAACAGTCATGTACAGTACCGTATCAAG
TGCCGTATTAAGTATAAAACCGAATGGTACCACGTTTCCTTTCGCTCGAA
AGTCTTTGAAGGCGCAAGTGTCTCTTCTGGCACGAAAAATATGTCGTCGC
GCTTCCGTCCCGTCTGCCTCGGAATGCGTTTTGCGAAGGTTCAAAGTGGC
GTACTTCGAGGTCGGCGCCGAGAAGGAGACGGTTGTCTCCGGGGTCCAAG
CGCCGGCGCTGCGCATTCCTGCCGGGGAGGGCGGGGCTTGGCCCCCTCCC
TTGGAGCCAGAGGCGCCACTTCCCCCCCCTCCGCCTCCGCCTCCGGCGGA
CGAGAACACCGGTCTCGGCGGGTGGCAGACGGTAGGCAGACGGTAGGCCA
GGAATTTGGCAAATATCGAGAGACGTAATGTAGGGTACAAGTTTTAACTC
GTGACAGGCGGTTCAGTATTGCCATGTGACATTTGATAGTTTGATAGCAG
CGCCAGTGGAACATTCATGTTCTGCGTTGTTTGTAAGATGATGCTCAAGA
CATTGGAGGAGTCTGCAGCAGAGATAAGAGGGGAAAGCGCTCGCGATGTG
TTGATTCGAATCTGGATTCGTGGAAACCCTTTCGTATCTTCGCTGTCTCG
AGCTCAGCACCACCTACAGCAGTACCAGGATCGTATATATAGCTATAGTG
CACCGATTTGCCCCCTCTTCGAGATCTAATTGTTTCTAGGGAGGCGGAAT
TGATACGACTAATTGTATTAATACTGTTAATCCAATTAATACTATGAATA
CTGTGGATGGATGCGGCATTACAGTCAGTAGAGGGATACATTTTATTAAT
AGATGCAAGCGATACAGGTAAGATAGTAGATGAATGGATGAAATGTTATC
GCGGGATGATATTGTCAACTCTCTTGTGAACGTGAAGACACAGGGTGTAC
GTTTGGGGAGAACGTGTGGGGTTGTGACAAACTTTCTTGATGGCGTCACG
CACACTCGTGGTGGGGCCGCACAGGTGAGCGTCCGTTTGGTGGACGAGGC
GGCAGAGGCAGAGACGAGACGGCTCAAGAAGGAGGCGAAGAAGGAGAGGA
AGCGAGCGAGAGAGGACAAGTCTGAGAGAGAAAAGGCACGTTGTCAAAAA
GGGAGATGAGAGGAGAAGGGAAGGGAAGAGAAGGTTAGGGGAGGGGGGCG
AGGGGGATCAGCGGCGGTGGCGATAGCAGAGACAGCGGAAACAATTACTA
GCGTTATCGTGGCCTTTCTCGCCACGACACCTTTGCTAATAATCCTCCCG
ACCCTCCCCCCCCCCCCCTTTCAAGACAAAAAAATCACATGTAACAGCTT
GGTCTCTCACCCCACAGCTCGCGCGTCCCGTCCGACTTTTACTGTGCTAC
CACTGTGCCGACGCGTGATGACGGTTGTTCTTTCGGGGGGCGCTGCATCG
TGTCGTGTGTCCCTCTCGTCCATTCCCTTTCGTCTCTTTTTATGCCCAAT
GTCCACATCCCATGTCCGTGTGTGGCGAAGATGCTCCTGGAGGCCATGGA
CGCGGACGATGCCATGGGGTCGTACGATCCCTGGGGCACGGGCAAGTACA
AGGGCATCGACATCAAGACGGAGGACCCGCGCGGGCCCGACGAAGCGGGT
GATAGCGGCGTGGCGGGAGCAGAGGGAGGGGAAGGGGGAGGGGGGGGTGG
TCCGGTGGCCTTCAAAAAGAGAAAGGGTGTTGGAAATAAGGGAAAGTTCC
GGAGGAAGGGTCGCGACGAAGAT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig968:110583..117705+

>mRNA_A-nodosum_M_contig968.5.1 ID=mRNA_A-nodosum_M_contig968.5.1|Name=mRNA_A-nodosum_M_contig968.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1056bp|location=Sequence derived from alignment at A-nodosum_M_contig968:110583..117705+ (Ascophyllum nodosum dioecious)
ATGGCGTCCTACTGGGTATCGCAGGAGCGGTACTTCTGCAAATACTGTAA
GGTCTGGCTTTCCAAGCATCAGGCGAGCATCCGGAATCATGACCAAGGGA
AGAAACACCAGGCCATCGTGGAGGAGTTCTTCCGGAAGAAGAGGGAGGAC
AAGCTCAAGGGGGCGAGCAGCGAGTCCGACCTCAAGAGGCAGATGGATCA
GATCGAGAAGGCAGCCCTTCAGGCGATCAAAAAGGACCAAGAGCTGTTCG
GCGGCGCGGGCGCGGGATCAGCCCCTCCCCCTCCCCCTCCCCCGCCACCA
CCATCCGACGATATCCCGCCCCCTCCTCCCCCGCCTCGACACCCACTAGA
GGGGGACGCAAACGCCTACTCGGAGGAACCTCCCCCTCCACCGCCACCCC
CCCCGGGGAGGCCTCCAGGGATTGAAGGATCATTCGGGGCAGCGAGAAAC
GCGGCACCGAATGCCGGGGTTGGAGCTGGAGCCACCGTACAAGGGGCGTG
GGAGGAGGGCGGGCAGTGGTATCTCCACGGGCAGGCGAGGGAAAGATTCG
AGTTTTTTTTTTACATTCATCAGGCCAAGCTGGCGGTTGATTCCCCTTGC
CAGATGTACGTGACTTCGGAAGGTCAGTGGGTGGACGCGATTGTGCTTGC
GGCGCAAGTGTCTCTTCTGGCACGAAAAATATGTCGTCGCGCTTCCGTCC
CGTCTGCCTCGGAATGCGTTTTGCGAAGGTTCAAAGTGGCGTACTTCGAG
GTCGGCGCCGAGAAGGAGACGGTTGTCTCCGGGGTCCAAGCGCCGGCGCT
GCGCATTCCTGCCGGGGAGGGCGGGGCTTGGCCCCCTCCCTTGGAGCCAG
AGGCGCCACTTCCCCCCCCTCCGCCTCCGCCTCCGGCGGACGAGAACACC
GGTCTCGGCGGGTGGCAGACGGTGAGCGTCCGTTTGGTGGACGAGGCGGC
AGAGGCAGAGACGAGACGGCTCAAGAAGGAGGCGAAGAAGGAGAGGAAGC
GAGCGAGAGAGGACAAGTCTGAGAGAGAAAAGGCACGTTGTCAAAAAGGG
AGATGA
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