prot_A-nodosum_M_contig968.4.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5KYH9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH9_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 3.870e-16 Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQYL 113
GC I RD A L Q+ Y S+V++F V+ A+RIPAS GV K D+ ++ ++P REA+G++MWV+T +RPD++ AVRAVAR P H A K+++YL
Sbjct: 683 GCAIERDVAAGTLTISQTAYVDSMVKRFDVQSASRIPASPGVDLGPKRDD-------EKGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILRYL 787
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 1.170e-15 Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQYL 113
GC RD A LK Q YA+ + +F V+ IP G++ LS+ D+ +E + +P+RE +G+LMW+AT TRPDIA+AVRAVAR+C +P H +A L ++ Y+
Sbjct: 59 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGMK-LSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYV 163
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 2.080e-15 Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQYL 113
GC RD A LK Q YA+ + +F V+ IP G++ LS+ D+ +E + +P+RE +G+LMW+AT TRPDIA+AVRAVAR+C +P H +A L ++ Y+
Sbjct: 101 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYV 205
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 2.090e-15 Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQYL 113
GC RD A LK Q YA+ + +F V+ IP G++ LS+ D+ +E + +P+RE +G+LMW+AT TRPDIA+AVRAVAR+C +P H +A L ++ Y+
Sbjct: 160 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYV 264
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 2.410e-15 Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQYL 113
GC RD A LK Q YA+ + +F V+ IP G++ LS+ D+ +E + +P+RE +G+LMW+AT TRPDIA+AVRAVAR+C +P H +A L ++ Y+
Sbjct: 334 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYV 438
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 2.530e-15 Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQYL 113
GC RD A LK Q YA+ + +F V+ IP G++ LS+ D+ +E + +P+RE +G+LMW+AT TRPDIA+AVRAVAR+C +P H +A L ++ Y+
Sbjct: 855 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYV 959
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 3.010e-15 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQY 112
GC R+++ L Q + + ++ V +P SSGV+ LS D + A +FP+RE VG+LMW+AT TRPDIA+AVRAVAR+C +P L H AA+ ++ Y
Sbjct: 184 GCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDADEV------ATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGY 287
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5KJH0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH0_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 3.390e-15 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQY 112
GC R+++ L Q + + ++ V +P SSGV+ LS D + A FP+RE VG+LMW+AT TRPDIA+AVRAVAR+C +P L H AA++++ Y
Sbjct: 581 GCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDADEV------ATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMEILGY 684
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 3.520e-15 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQY 112
GC R+++ L Q + + ++ V +P SSGV+ LS D + A +FP+RE VG+LMW+AT TRPDIA+AVRAVAR+C +P L H AA+ ++ Y
Sbjct: 1520 GCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDADEV------ATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGY 1623
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 3.520e-15 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 0
Query: 2 GCHITRDRKAHELKRDQSLYAKSVVEKFSVKKANRIPASSGVQTLSKADEPQTPEEQKEALKFPYREAVGALMWVATMTRPDIASAVRAVARFCENPGLAHKKAALKVMQY 112
GC R+++ L Q + + ++ V +P SSGV+ LS D + A +FP+RE VG+LMW+AT TRPDIA+AVRAVAR+C +P L H AA+ ++ Y
Sbjct: 1306 GCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDADEV------ATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGY 1409 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig968.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig968.4.1 ID=prot_A-nodosum_M_contig968.4.1|Name=mRNA_A-nodosum_M_contig968.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=113bpback to top |