prot_A-nodosum_M_contig9674.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9674.1.1
Unique Nameprot_A-nodosum_M_contig9674.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length50
Homology
BLAST of mRNA_A-nodosum_M_contig9674.1.1 vs. uniprot
Match: A0A2R4QPY7_9PHAE (Uncharacterized protein ycf35 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY7_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.770e-19
Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    1 MIYSDNLKSTIYQKAHRNYVAFKSNKLDYDIITDSQSWTKK-IITIFLK 48
            +I+S+NLKSTIYQK HRNYVAFKS+KLDYDIITDSQSWTKK IIT FLK
Sbjct:   43 VIFSENLKSTIYQKNHRNYVAFKSDKLDYDIITDSQSWTKKEIITRFLK 91          
BLAST of mRNA_A-nodosum_M_contig9674.1.1 vs. uniprot
Match: A0A125QZS2_9PHAE (Uncharacterized protein ycf35 n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A125QZS2_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.010e-12
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MIYSDNLKSTIYQKAHRNYVAFKSNKLDYDIITDSQSWTKK-IITIFLK 48
            ++ SD LKS+IY   H+NY+AFK NKL YDIITDS+SWT+K II++FLK
Sbjct:   41 IVNSDYLKSSIYDTTHQNYLAFKYNKLSYDIITDSRSWTQKEIISLFLK 89          
BLAST of mRNA_A-nodosum_M_contig9674.1.1 vs. uniprot
Match: A0A0R6M4I4_UNDPI (Uncharacterized protein ycf35 n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6M4I4_UNDPI)

HSP 1 Score: 64.7 bits (156), Expect = 5.580e-12
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MIYSDNLKSTIYQKAHRNYVAFKSNKLDYDIITDSQSWTKK-IITIFLK 48
            +I+  NLKS+IY+ + +NY+AFKSN L YDIITDSQSWT+K II+ FLK
Sbjct:   40 VIFPKNLKSSIYENSDQNYLAFKSNNLSYDIITDSQSWTQKEIISNFLK 88          
BLAST of mRNA_A-nodosum_M_contig9674.1.1 vs. uniprot
Match: A0A8F0F8T3_9PHAE (Uncharacterized protein ycf35 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F8T3_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 8.110e-9
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    1 MIYSDNLKSTIYQKAHRNYVAFKSNKLDYDIITDSQSWTKK-IITIFLK 48
            +++S NLKS+IY  + +NY++FK + L Y IITDSQSWT+K +I  FLK
Sbjct:   41 LVFSKNLKSSIYNNSCQNYLSFKFDNLSYSIITDSQSWTQKEVINRFLK 89          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9674.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2R4QPY7_9PHAE4.770e-1985.71Uncharacterized protein ycf35 n=3 Tax=Fucaceae Tax... [more]
A0A125QZS2_9PHAE2.010e-1265.31Uncharacterized protein ycf35 n=13 Tax=Sargassacea... [more]
A0A0R6M4I4_UNDPI5.580e-1265.31Uncharacterized protein ycf35 n=27 Tax=Laminariale... [more]
A0A8F0F8T3_9PHAE8.110e-955.10Uncharacterized protein ycf35 n=2 Tax=Laminariales... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9674contigA-nodosum_M_contig9674:11813..11962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9674.1.1mRNA_A-nodosum_M_contig9674.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9674 11677..12138 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9674.1.1 ID=prot_A-nodosum_M_contig9674.1.1|Name=mRNA_A-nodosum_M_contig9674.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=50bp
MIYSDNLKSTIYQKAHRNYVAFKSNKLDYDIITDSQSWTKKIITIFLKS*
back to top