prot_A-nodosum_M_contig964.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig964.4.1
Unique Nameprot_A-nodosum_M_contig964.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length147
Homology
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: D7G240_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G240_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 9.770e-96
Identity = 135/146 (92.47%), Postives = 139/146 (95.21%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATGLHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSLACFNS 146
            MIYNLYIFNRKGKCLYYREWNRPQNTLENAAD+GEEQRLMFGMLYSLKE+VTKMS DPA+ GLHALKT SYTLHHLET SGLRFVLNTDNNAGDLRPTLR LYSGIFVEYVAKHPQFNPVDGSPIRL AFD+RLEEYLRSLACF S
Sbjct:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADDGEEQRLMFGMLYSLKEVVTKMSTDPASAGLHALKTDSYTLHHLETGSGLRFVLNTDNNAGDLRPTLRQLYSGIFVEYVAKHPQFNPVDGSPIRLPAFDSRLEEYLRSLACFKS 146          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A835ZQ36_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ36_9STRA)

HSP 1 Score: 185 bits (470), Expect = 7.760e-58
Identity = 89/144 (61.81%), Postives = 107/144 (74.31%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATGLHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSLACF 144
            MI+N YIFNR GKCL+Y+EWNRPQNTL++  D+GEE+RLMFGMLYSL+ELV KM        L +  T SYTL+  ETASGLRFVLNTDN AGDL   LRH+Y  IFV+ V KHP F P  G P++L  F+  LE+Y++SL CF
Sbjct:    1 MIFNFYIFNRNGKCLFYKEWNRPQNTLQH--DDGEEKRLMFGMLYSLQELVGKMGGGDGKGALQSFTTDSYTLNFFETASGLRFVLNTDNRAGDLTAILRHIYGNIFVDLVVKHPMFEPKAGVPLQLPMFEEELEKYMKSLPCF 142          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A7S2AMS8_9STRA (Trafficking protein particle complex subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMS8_9STRA)

HSP 1 Score: 183 bits (464), Expect = 6.560e-57
Identity = 86/145 (59.31%), Postives = 109/145 (75.17%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATGLHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSLACFN 145
            MIYN YIF+R+G CLYYREWNRP ++  +  D  EE++L+FGML+S+KELV++MS  P   GLH LKT ++TLHHLETASGLRFVLNTD + GDLRP+LRH++S IFVEYV K+P ++ +   PI    F   L  YL SL+CF 
Sbjct:    1 MIYNFYIFDRRGTCLYYREWNRPYSSFSDY-DAAEERKLVFGMLFSIKELVSRMSSRPGTEGLHCLKTNNFTLHHLETASGLRFVLNTDGDTGDLRPSLRHIFSSIFVEYVIKNPLYDRLSTEPIDSPLFSRHLGVYLESLSCFR 144          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A7S2RBL8_9STRA (Trafficking protein particle complex subunit n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBL8_9STRA)

HSP 1 Score: 176 bits (445), Expect = 6.580e-54
Identity = 82/146 (56.16%), Postives = 110/146 (75.34%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATGLHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSLACFNS 146
            MIYNLYIFNRKG CLYYREW RP N+     D+ EE++L+FGML+S+KE+V++M+   A  GL +++TG++TLHHLET +G RFVLNTD    DLR  L+H+YS IFVEYV K+P F+P+  + I +  FD+ L EY++ L+CF S
Sbjct:    1 MIYNLYIFNRKGVCLYYREWKRPFNSFP-PDDQDEERKLVFGMLFSIKEMVSRMTPRTADAGLSSIQTGNFTLHHLETVTGFRFVLNTDTATTDLRQNLQHIYSEIFVEYVLKNPLFDPMTSTSIEIPLFDSNLSEYIQLLSCFRS 145          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A812VIE8_SYMMI (Trafficking protein particle complex subunit n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VIE8_SYMMI)

HSP 1 Score: 152 bits (384), Expect = 8.190e-45
Identity = 70/141 (49.65%), Postives = 101/141 (71.63%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATGLHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSL 141
            MIYNLYI++RKGKCL+Y+EW+RP NTL  A D GEE+RLMFGML+SLK+L  K++      GLH +KT +YTLHH E+ +G+ F++N+D +  DL   L+H+Y+ IFVE V ++P +       I    F+ +LE+Y+R++
Sbjct:    1 MIYNLYIYDRKGKCLFYKEWSRPMNTL--ADDPGEEKRLMFGMLFSLKDLAAKLAPSIGPQGLHTVKTNAYTLHHFESVTGMSFIMNSDPSLPDLYHNLQHIYNNIFVECVIRNPLYRHCPHDAIDCPLFEKKLEDYVRTI 139          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A067CRD6_SAPPC (Trafficking protein particle complex subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRD6_SAPPC)

HSP 1 Score: 150 bits (378), Expect = 8.550e-44
Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATGLHALKT---GSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSLACFN 145
            MIYNLYIFNR G CL Y EWNR  + +   +D  EE+RLMFG+++SLKE + KM+   + T   +LKT    +YT HHLETASGLRF+L +DNN GDL+  L+HLY  ++VE V K+P  +     PI+ + F   +  Y+ SL CF 
Sbjct:    1 MIYNLYIFNRAGACLLYEEWNRSSDAM-TLSDAEEEKRLMFGLIFSLKEFLRKMAPTASTTSSQSLKTFKTDTYTCHHLETASGLRFILTSDNNTGDLQDVLQHLYGNLYVELVTKNPVHDAKSTKPIKCKLFRHSVRHYMESLPCFR 147          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A4D9D8U8_9STRA (Trafficking protein particle complex subunit n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8U8_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.250e-43
Identity = 82/150 (54.67%), Postives = 107/150 (71.33%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAAT---GLHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDG-SPIRLR-AFDARLEEYLRSLACFN 145
            MIYNLYIF+R+G CL+YREW RP NTL  A D  EE++LMFGMLYS+K LV  +    A +   GL+ L+T +YTLHH ET +GLRFVLNTDN+  D+R  LRH+YSGI+V++V ++PQ+   +G S  RL  AF   LE+Y+ +L  F 
Sbjct:    1 MIYNLYIFDRRGACLFYREWCRPLNTL--AEDPEEEKKLMFGMLYSIKGLVAALGSKNAPSSSDGLNHLRTNAYTLHHFETLTGLRFVLNTDNSIVDMRGHLRHIYSGIWVQHVVQNPQYKIGEGGSAGRLPPAFAQSLEQYVTNLPGFK 148          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A7R9YCB9_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCB9_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.400e-42
Identity = 75/146 (51.37%), Postives = 97/146 (66.44%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATG-----LHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSL 141
            MI+N+YIF+R G CL+Y+EW+RP NTL    D GE+ RLMFGML+SLKE+V KMS   A  G     +  ++T +Y+ H  ET +GLRFVLN D  A  LR  L  +Y+GIFVE V K+P ++P DG P     F+  LE YLR+L
Sbjct:   36 MIFNMYIFSRSGSCLFYKEWHRPLNTLSGEEDPGEDARLMFGMLFSLKEIVGKMSGRSAEKGERREDIQVMRTSTYSTHLYETQTGLRFVLNVDAAAPSLRGELEEIYAGIFVEKVIKNPLYDPRDGPPEIPEDFEEELEAYLRAL 181          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A6A4ZH59_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZH59_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.390e-41
Identity = 72/149 (48.32%), Postives = 98/149 (65.77%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATGLHALKTGS---YTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSLACFNS 146
            MIYN YIFNR G CL Y EWNR  + +    D  EE+RLMFG+++SLKE + KMS   +    H+LKT     YT HHLET SGLRF+L+TDN +GDL+  L+++Y  ++VE V K+P  +     P++ + F A ++ Y+ SLACF S
Sbjct:   17 MIYNFYIFNRSGACLMYEEWNRSNDAM-TLNDAEEEKRLMFGLIFSLKEFLRKMSPPTSTPQTHSLKTFKTDVYTCHHLETPSGLRFILSTDNQSGDLQEALQYMYGNLYVELVTKNPVHDARSTKPVKCKLFRANIKAYIESLACFKS 164          
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Match: A0A8J5XSS5_DIALT (Trafficking protein particle complex subunit n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSS5_DIALT)

HSP 1 Score: 139 bits (351), Expect = 9.780e-40
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 0
Query:    1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKELVTKMSKDPAATGLHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLRHLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSLACFNS 146
            MIYNLYI+N+ G CL Y EW RP  T  +A  +   Q+LMFG L+SLK++V K++ D    G HA  T  + L++ ETA+GLRFVLNTD N GD+R  +R++YS +FVEY +K+  +    G P+    F   L++Y+RSL  F S
Sbjct:    1 MIYNLYIYNKHGVCLLYHEWKRPNITAGSAMAD---QKLMFGFLFSLKQVVNKLTPDSGMPGFHACSTNKFKLNYYETATGLRFVLNTDPNCGDMRECIRYIYSAVFVEYASKNALYTA--GEPLDNEQFLFALDKYVRSLPAFTS 141          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig964.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G240_ECTSI9.770e-9692.47Trafficking protein particle complex subunit n=2 T... [more]
A0A835ZQ36_9STRA7.760e-5861.81Trafficking protein particle complex subunit n=1 T... [more]
A0A7S2AMS8_9STRA6.560e-5759.31Trafficking protein particle complex subunit n=1 T... [more]
A0A7S2RBL8_9STRA6.580e-5456.16Trafficking protein particle complex subunit n=2 T... [more]
A0A812VIE8_SYMMI8.190e-4549.65Trafficking protein particle complex subunit n=1 T... [more]
A0A067CRD6_SAPPC8.550e-4449.32Trafficking protein particle complex subunit n=3 T... [more]
A0A4D9D8U8_9STRA1.250e-4354.67Trafficking protein particle complex subunit n=1 T... [more]
A0A7R9YCB9_9STRA2.400e-4251.37Trafficking protein particle complex subunit n=1 T... [more]
A0A6A4ZH59_9STRA1.390e-4148.32Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A8J5XSS5_DIALT9.780e-4047.26Trafficking protein particle complex subunit n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 2..141
e-value: 7.5E-51
score: 184.9
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 2..140
e-value: 1.3E-32
score: 112.7
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 2..142
NoneNo IPR availableGENE3D3.30.450.70coord: 1..146
e-value: 6.4E-44
score: 151.4
NoneNo IPR availablePANTHERPTHR23249:SF16TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1coord: 2..142
NoneNo IPR availableCDDcd14855TRAPPC1_MUM2coord: 3..137
e-value: 7.48422E-69
score: 202.007
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig964contigA-nodosum_M_contig964:22066..29981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig964.4.1mRNA_A-nodosum_M_contig964.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig964 21867..30869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig964.4.1 ID=prot_A-nodosum_M_contig964.4.1|Name=mRNA_A-nodosum_M_contig964.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=147bp
MIYNLYIFNRKGKCLYYREWNRPQNTLENAADEGEEQRLMFGMLYSLKEL
VTKMSKDPAATGLHALKTGSYTLHHLETASGLRFVLNTDNNAGDLRPTLR
HLYSGIFVEYVAKHPQFNPVDGSPIRLRAFDARLEEYLRSLACFNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007233TRAPPC
IPR011012Longin-like_dom_sf