prot_A-nodosum_M_contig9626.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9626.1.1
Unique Nameprot_A-nodosum_M_contig9626.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length560
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9626.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 36..52
score: 28.24
coord: 73..98
score: 40.77
coord: 53..70
score: 40.0
coord: 2..14
score: 38.46
coord: 14..35
score: 38.18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..560
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9626contigA-nodosum_M_contig9626:2..4221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9626.1.1mRNA_A-nodosum_M_contig9626.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9626 2..4221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9626.1.1 ID=prot_A-nodosum_M_contig9626.1.1|Name=mRNA_A-nodosum_M_contig9626.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=560bp
AAPSSAPTNSPTPPLTNNPTTFAPIPTSIPTPSIPPAAQTSAPTNSPTPP
TADPTTPVPIPSPIPNSTITPNLPTSAPTNSPTPPTTQPTIPAPIPSPTP
IPTKISDSPTSAPTIFQTPLTTHQMTPAPTPFLTSVPTTATAAPTSAPTN
SPPLPTIDPTTPAPLPSTTPASTITPDPQTLSPMATPTSPPRTPTNTRTP
AAKPTSTTPLTILPQAPTTTPTTTVPTTRPPTLRPSTVPSPSQFPTTQPL
FVRTWTPNFGPTPPPTILTFTPTAVPTANPTVKFIAIPSGTVTFSEAPTS
SPTAAPTAFPTATPSVMHTDDPIDTSPDETSSPLSKRSPSSAPPTSQPAD
GTPPSGAIRTVTPRTGERTVMPSSTTSSTQIPSPELFRPTSLHTLTSSPT
DATKSLTPAETVSPTGIEGSARPREASESPHGTNDPTFPPIATVTSTPAG
GTPPSSVTRTATPTTVGTPSPDIATSTPHGTPEETTSESPVLGPTEGDKP
EPTSTPTAEGLTATPSSTNFPTQIPSSEPFLTFFPTATPSTGGVTWSPTP
AWTVSPTTKE
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