prot_A-nodosum_M_contig962.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig962.14.1
Unique Nameprot_A-nodosum_M_contig962.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length72
Homology
BLAST of mRNA_A-nodosum_M_contig962.14.1 vs. uniprot
Match: A0A6H5L6Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z1_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.470e-11
Identity = 27/49 (55.10%), Postives = 41/49 (83.67%), Query Frame = 0
Query:   24 IKRMVVELYDDTSRRYNAELTAAIRKAPIPIVFINCDIWQSKVSGEKFI 72
            IK+M+VE+Y  T+R +N+EL   +R+A IPI+++NCD+W S+VSGEK+I
Sbjct:  256 IKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYI 304          
BLAST of mRNA_A-nodosum_M_contig962.14.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.470e-11
Identity = 27/49 (55.10%), Postives = 41/49 (83.67%), Query Frame = 0
Query:   24 IKRMVVELYDDTSRRYNAELTAAIRKAPIPIVFINCDIWQSKVSGEKFI 72
            IK+M+VE+Y  T+R +N+EL   +R+A IPI+++NCD+W S+VSGEK+I
Sbjct:  177 IKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYI 225          
BLAST of mRNA_A-nodosum_M_contig962.14.1 vs. uniprot
Match: D7G3L2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L2_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 4.500e-10
Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   14 FQPERLNHKGIKRMVVELYDDTSRRYNAELTAAIRKAPIPIVFINCDIWQSKVSGEKFI 72
            F    +N+K +K+++ E+Y  T++ +NA +   +R A IPI+++NCD+W S VSG K+I
Sbjct:  106 FDVTGINNKAVKKVIAEMYHATTQEFNASMQKTLRNATIPILYVNCDLWTSHVSGLKYI 164          
BLAST of mRNA_A-nodosum_M_contig962.14.1 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 6.230e-10
Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   14 FQPERLNHKGIKRMVVELYDDTSRRYNAELTAAIRKAPIPIVFINCDIWQSKVSGEKFI 72
            F    +N+K +K+++ ++Y  T+R +NA +   +R A IPI+++NCD+W S VSG K+I
Sbjct:  106 FDVTGINNKAVKKVIAKMYHVTTREFNASMQKTLRNATIPILYVNCDLWTSHVSGLKYI 164          
BLAST of mRNA_A-nodosum_M_contig962.14.1 vs. uniprot
Match: A0A6H5JP19_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP19_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 4.410e-7
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   27 MVVELYDDTSRRYNAELTAAIRKAPIPIVFINCDIWQSKVSGEKFI 72
            M+VE+Y+ T +  N +L   +  A IPI++ NCDIW +KVSGEKFI
Sbjct:    1 MIVEMYNATLKVVNKDLQRQLALAIIPILYANCDIWTTKVSGEKFI 46          
BLAST of mRNA_A-nodosum_M_contig962.14.1 vs. uniprot
Match: A0A6H5K7T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T5_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 8.310e-7
Identity = 19/47 (40.43%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   24 IKRMVVELYDDTSRRYNAELTAAIRKAPIPIVFINCDIWQSKVSGEK 70
            +K+M+VE+Y  T+ ++N ++   +R+A +PI+++NCD+W SK S +K
Sbjct:   23 VKKMIVEMYAATTEKFNRQILKDVRRALVPILYMNCDLWTSKGSQDK 69          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig962.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L6Z1_9PHAE1.470e-1155.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX27_9PHAE1.470e-1155.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3L2_ECTSI4.500e-1040.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4Z8_ECTSI6.230e-1040.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP19_9PHAE4.410e-752.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7T5_9PHAE8.310e-740.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig962contigA-nodosum_M_contig962:160646..162117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig962.14.1mRNA_A-nodosum_M_contig962.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig962 160646..162118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig962.14.1 ID=prot_A-nodosum_M_contig962.14.1|Name=mRNA_A-nodosum_M_contig962.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=72bp
HCLSLIRGEEKDRFQPERLNHKGIKRMVVELYDDTSRRYNAELTAAIRKA
PIPIVFINCDIWQSKVSGEKFI
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