prot_A-nodosum_M_contig9600.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9600.12.1
Unique Nameprot_A-nodosum_M_contig9600.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length170
Homology
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 1.280e-25
Identity = 66/115 (57.39%), Postives = 81/115 (70.43%), Query Frame = 0
Query:   68 AVLAGARAKNAQV-LVRNMTLYRGRGKGVMIDSAGGTRGRAGKESA----------KKTAKAKTEPCLFFCKYGKCSKSDEECPYEHDKTKVAVCRAFLR-GECDKKDECLLTHA 170
            AV+AGARAK  ++ +VRNMTLYRG+G+  ++ +        GKE+A          KKT  A  EPCLFFC++GKCSKSDEEC Y HD+ KVAVCRAFLR G CDK ++CLLTHA
Sbjct:  715 AVVAGARAKRTRLQVVRNMTLYRGKGQVAVVGT--------GKEAASXXXXXXXSNKKTKTA--EPCLFFCRFGKCSKSDEECRYVHDRAKVAVCRAFLRKGGCDKGNKCLLTHA 819          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 5.230e-24
Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:   74 RAKNAQV-LVRNMTLYRGRGKGVMIDSAGGTRGRAGKESAKKTAKAKT-EPCLFFCKYGKCSKSDEECPYEHDKTKVAVCRAFLR-GECDKKDECLLTHA 170
            RAK  ++ +VRNMTLYRG+G+  ++ +    +  A   +AK+ +  KT EPCLFFC++GKCS+SDEEC Y HD+ KVAVCRAFLR G CDK D+CLLTHA
Sbjct:  738 RAKRTRLQVVRNMTLYRGKGQVAVVGTG---KEAASAAAAKRKSNNKTGEPCLFFCRFGKCSRSDEECRYVHDRAKVAVCRAFLRKGGCDKGDKCLLTHA 834          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: A0A1Y1Y6V5_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6V5_9FUNG)

HSP 1 Score: 60.1 bits (144), Expect = 1.750e-7
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  118 AKTEPCLFFCKYGKCSKSDEECPYEHDKTKVAVCRAFLRGECDKKDECLLTH 169
            A+++ C +F ++G+CSK  + CPY HD  +VA+C  FLRG C+K +EC  +H
Sbjct:  269 ARSKYCQYFNRFGRCSKGSK-CPYIHDPKRVAICTKFLRGACEKPEECPFSH 319          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: UPI00106DCF26 (zinc finger CCCH domain-containing protein 3-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106DCF26)

HSP 1 Score: 60.1 bits (144), Expect = 1.990e-7
Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:  114 KTAKAKTEP-CLFFCKYGKCSKSDE-ECPYEHDKTKVAVCRAFLRGECDK 161
            K  K+K+E  C+FF K+GKC+K ++ +CPY HD TK+AVC  FLRG+C +
Sbjct:  695 KKQKSKSEEYCMFFNKFGKCTKKEQGKCPYVHDPTKIAVCTRFLRGKCQQ 744          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: A0A1W0A1W5_9STRA (Smad-interacting and CPSF-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1W5_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.610e-7
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  118 AKTEPCLFFCKYGKCSKSDEECPYEHDKTKVAVCRAFLRGECDKKDECLLTH 169
            ++TE CL++ ++G C+K +  CPY HD  KVAVCR FLR ECD   +C L+H
Sbjct:  106 SRTEYCLYYNRFGVCNKKNA-CPYIHDSRKVAVCRKFLRNECDDP-KCTLSH 155          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: T0QWW2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QWW2_SAPDV)

HSP 1 Score: 58.2 bits (139), Expect = 3.370e-7
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0
Query:  115 TAKAKTEPCLFFCKYGKCSKSDEECPYEHDKTKVAVCRAFLRGECDKKDECLLTH 169
            +A  +TE C ++ ++G C+K +  CP+ HD  KVAVCR FLRGECD    C L+H
Sbjct:   61 SATTRTEYCRYYTRFGVCNKQNA-CPFIHDSRKVAVCRKFLRGECDDA-ACTLSH 113          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: A0A7D9EIL7_PARCT (Zinc finger CCCH domain-containing 3-like n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EIL7_PARCT)

HSP 1 Score: 59.3 bits (142), Expect = 3.640e-7
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  114 KTAKAKTEP-CLFFCKYGKCSKSDE-ECPYEHDKTKVAVCRAFLRGECDKKD-ECLLTH 169
            K  K+K+E  C+F+ K+GKC+K  + +CPY HD TK+AVC  FLRG+C + D  C  +H
Sbjct:  719 KKQKSKSEEYCMFYNKFGKCTKHTQGKCPYIHDPTKIAVCTRFLRGKCQQMDGTCPFSH 777          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: T0SBE1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SBE1_SAPDV)

HSP 1 Score: 58.2 bits (139), Expect = 5.270e-7
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0
Query:  115 TAKAKTEPCLFFCKYGKCSKSDEECPYEHDKTKVAVCRAFLRGECDKKDECLLTH 169
            +A  +TE C ++ ++G C+K +  CP+ HD  KVAVCR FLRGECD    C L+H
Sbjct:  113 SATTRTEYCRYYTRFGVCNKQNA-CPFIHDSRKVAVCRKFLRGECDDA-ACTLSH 165          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: A0A482WFT7_LAOST (Uncharacterized protein n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482WFT7_LAOST)

HSP 1 Score: 58.5 bits (140), Expect = 6.920e-7
Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 0
Query:  114 KTAKAKTEPCLFFCKYGKCS-KSDEECPYEHDKTKVAVCRAFLRGECDKKDECLLTH 169
            K  +   EPC  + ++GKCS K +  C   HDK  VAVCR FLRG+CD K+ CLL+H
Sbjct:  868 KKMRKNNEPCPIYHRFGKCSGKENGSCCRVHDKKHVAVCRRFLRGDCDNKN-CLLSH 923          
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Match: W2R4W0_PHYPN (C3H1-type domain-containing protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R4W0_PHYPN)

HSP 1 Score: 57.0 bits (136), Expect = 1.700e-6
Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  113 KKTAKAKTEPCLFFCKYGKCSKSDEECPYEHDKTKVAVCRAFLRGECDKKDECLLTH 169
            KK  K +TE C F+ ++G C K+ EEC + HD  +VA+CR FL+ EC+   +CLL+H
Sbjct:  237 KKNVKVRTEYCSFYNRFGYC-KNKEECRFIHDSRRVAMCRKFLKNECNDP-KCLLSH 291          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9600.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LB82_ECTSI1.280e-2557.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC32_9PHAE5.230e-2458.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y1Y6V5_9FUNG1.750e-746.15Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
UPI00106DCF261.990e-754.00zinc finger CCCH domain-containing protein 3-like ... [more]
A0A1W0A1W5_9STRA2.610e-751.92Smad-interacting and CPSF-like n=1 Tax=Thraustothe... [more]
T0QWW2_SAPDV3.370e-749.09Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A7D9EIL7_PARCT3.640e-749.15Zinc finger CCCH domain-containing 3-like n=2 Tax=... [more]
T0SBE1_SAPDV5.270e-749.09Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A482WFT7_LAOST6.920e-750.88Uncharacterized protein n=1 Tax=Laodelphax striate... [more]
W2R4W0_PHYPN1.700e-647.37C3H1-type domain-containing protein n=9 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1000.10coord: 106..170
e-value: 7.2E-8
score: 34.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availablePANTHERPTHR46156CCCH ZINGC FINGERcoord: 78..169
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 117..146
score: 12.276813
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 150..170
score: 8.530562

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9600contigA-nodosum_M_contig9600:16407..16916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9600.12.1mRNA_A-nodosum_M_contig9600.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9600 16407..16916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9600.12.1 ID=prot_A-nodosum_M_contig9600.12.1|Name=mRNA_A-nodosum_M_contig9600.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=170bp
EAVVSVSATEASRQGTKKPAPTAGNVPLSASRVSKPPLVSSATRSPAKTA
AVLRKPRGRNVVSGRASAVLAGARAKNAQVLVRNMTLYRGRGKGVMIDSA
GGTRGRAGKESAKKTAKAKTEPCLFFCKYGKCSKSDEECPYEHDKTKVAV
CRAFLRGECDKKDECLLTHA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH