prot_A-nodosum_M_contig96.48.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.48.2
Unique Nameprot_A-nodosum_M_contig96.48.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length184
Homology
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: D8LFF1_ECTSI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFF1_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.930e-53
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 0
Query:   80 FDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKSIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 183
            FDEGS+C P  ARA AL+R A K +D++VHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPD VL EFK +P EVEVDMS+PE+GRMS+AGQVLVDLATKRVY
Sbjct:   61 FDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 164          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: A0A8K1CT02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT02_PYTOL)

HSP 1 Score: 75.1 bits (183), Expect = 7.970e-14
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 0
Query:   79 QFDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKSIPKEVEVDMS 160
            +F++    EP    A  LVR+A++K++KY H DRY+  YMP G+ FMRN P PL+ C+P GIP+   EE   + + + +DM+
Sbjct:   62 EFEQNKHLEPNSGLAKRLVREAEEKLEKYTHPDRYVYNYMPGGTRFMRNAPIPLDVCFPDGIPEG--EEVSPL-EAINIDMT 140          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: A0A2D4C2N7_PYTIN (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2N7_PYTIN)

HSP 1 Score: 72.8 bits (177), Expect = 6.190e-13
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0
Query:   79 QFDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKSIPKEVEV 157
            QFD     +P       LVR+A++K++KY H DRY+  YMP G+ FMRNPP PL+ C+P G          +IP++VEV
Sbjct:   62 QFDSHKALDPNSGLVKRLVREAEEKLEKYTHPDRYVFNYMPGGTRFMRNPPIPLDVCFPDG----------NIPEDVEV 130          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: F0WM63_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM63_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.640e-12
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0
Query:   79 QFDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSV 144
            QFD      P   +A   +++A +K+ KY H DRY+  YMP G+ FMRN P PLE C+P G+P+ V
Sbjct:   56 QFDANRHLAPESDQAKFAIKEANEKLKKYTHPDRYVFNYMPGGTKFMRNAPLPLEVCFPNGVPEDV 121          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: W4G4K6_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4K6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.970e-12
Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 0
Query:   79 QFDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGI-PDSVLEEFKSIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 183
            QF+E    + G A+   L+R+A  +++KY H D Y+  +MP GS FMRNPP PLE C+P GI PD V  E   + K + +D S   +  + +    LVD +TK  Y
Sbjct:   60 QFNEHKHTDIGAAQR--LLREATAELEKYTHPDPYVVVHMPGGSKFMRNPPLPLEVCFPDGIIPDDV--EVSPV-KAINIDTSPYREDDLKQTA--LVDFSTKTAY 158          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: A0A024UBI6_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBI6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.260e-11
Identity = 43/106 (40.57%), Postives = 59/106 (55.66%), Query Frame = 0
Query:   79 QFDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGI-PDSVLEEFKSIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 183
            QFD+    +   A A  L+R+A  +++KY H D Y+  +MP GS FMRNPP PLE C+P GI PD V  E   + K + +D +   +  +     VLVD  TK  Y
Sbjct:   60 QFDDNKHTDL--AVAQRLIREANAQLEKYTHPDPYVVVHMPGGSKFMRNPPLPLEVCFPDGIIPDDV--EVSPV-KAINIDTTPYREDELKET--VLVDFTTKTSY 158          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: A0A1V9ZGE2_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGE2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.260e-11
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   93 ATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGI-PDSVLEEFKSIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 183
            A  L+RDAQ K++ Y H D Y+  +MP GS FMRNPP PLE C+P GI PD V  E   + K + +D +   +  +     VLVD  TK  Y
Sbjct:   72 AERLIRDAQAKLNDYTHPDPYVVVHMPGGSKFMRNPPLPLEVCFPDGIIPDDV--EVSPL-KAINIDTTPYREDELKET--VLVDFTTKSSY 158          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: A0A7S2W4S4_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4S4_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.260e-11
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0
Query:   79 QFDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKSIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRV 182
            +FD    C+P  A+A  L+++A+K++  Y H D Y   +MP G+ FMRNPP P+E C+P G    +  +   I    ++ +SK E G+ S  G VL+D   K +
Sbjct:   56 RFDAERGCQP--AKAVRLIKEAKKELHYYTHPDPYCVAFMPGGTLFMRNPPIPMEVCFPDG---DLPSDAPKITFNPDMSVSKKETGK-SAVGSVLIDFTKKNM 153          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: A0A7S2KZH1_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KZH1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.160e-11
Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0
Query:   79 QFDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKSIPKEVEVDMSKPEDGRMSRAGQVLVDLATK 180
            +FD    C P   +A   +R+ ++++ +Y H D Y  P+MP GS FMRNPP P++ C+P G    +  +   +    ++ + K E G+ S  GQVLVD  +K
Sbjct:   56 RFDANRNCAPD--KANRFLREGKEELQEYTHPDPYRIPFMPGGSMFMRNPPLPMDVCFPDG---DIPADAPKVTLNPDMSICKEETGK-SAVGQVLVDFTSK 151          
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Match: A0A1V9Y4U2_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4U2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.730e-11
Identity = 45/106 (42.45%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   79 QFDEGSRCEPGGARATALVRDAQKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGI-PDSVLEEFKSIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 183
            QFD         A A  L+ DA KKM ++ H D Y   +MP GS FMRNPP PLE C+P GI PD V  E   + K + +D +   +  +     VLVD ATK  Y
Sbjct:   60 QFDANKNAS--AAVAERLISDAHKKMAEFTHPDPYTVVHMPGGSKFMRNPPLPLEVCFPDGIIPDDV--EVSPL-KYINIDTTPYREDEIKET--VLVDFATKSSY 158          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.48.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFF1_ECTSI1.930e-5380.77NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A8K1CT02_PYTOL7.970e-1442.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C2N7_PYTIN6.190e-1344.30NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
F0WM63_9STRA5.640e-1245.45NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
W4G4K6_9STRA8.970e-1240.57NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A024UBI6_9STRA1.260e-1140.57NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A1V9ZGE2_9STRA1.260e-1144.57NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A7S2W4S4_9STRA2.260e-1136.54NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A7S2KZH1_9STRA3.160e-1135.29NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A1V9Y4U2_9STRA6.730e-1142.45NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:456855..458181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.48.2mRNA_A-nodosum_M_contig96.48.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 456662..458727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.48.2 ID=prot_A-nodosum_M_contig96.48.2|Name=mRNA_A-nodosum_M_contig96.48.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=184bp
MQSVGVKQRAGQACRFSGDGRGVVNRTCVEWTLAQGACSLGARRCTSDFF
RLPALAAHIHTNIYTYIHTFIHIHTCTHQFDEGSRCEPGGARATALVRDA
QKKMDKYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKS
IPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY*
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