prot_A-nodosum_M_contig96.32.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.32.1
Unique Nameprot_A-nodosum_M_contig96.32.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length212
Homology
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: D8LFF2_ECTSI (Ribosomal_L16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFF2_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 5.550e-145
Identity = 202/211 (95.73%), Postives = 205/211 (97.16%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLEKAIL 211
            MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVD FPMV HLVSDEKEQLTSEALEAARVSANKYM K+AGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKP GTTARV+IGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKY REEYV+GRKEGWLQKDGNSVKYIAQHGPL KAIL
Sbjct:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDDFPMVVHLVSDEKEQLTSEALEAARVSANKYMAKFAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPQGTTARVAIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYPREEYVRGRKEGWLQKDGNSVKYIAQHGPLAKAIL 211          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: A0A7S2Y043_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y043_9STRA)

HSP 1 Score: 363 bits (931), Expect = 1.520e-125
Identity = 172/207 (83.09%), Postives = 191/207 (92.27%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLE 207
            MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIY+VG KKA VD FP V HLVSDEKEQLTSEALEAARV+ NKY+ KYAGK+ +H+RIRAHP+HV+RINKMLSCAGADRLQTGMRHAYGKP GT+ARV+IGQ+++S+R +DNH   AVEALRRAKFKFPGRQKIL+SNKWGFTK+ REEYV+GRKEGWLQ DGNSVKYIA HGPL+
Sbjct:   29 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYDVGQKKAGVDYFPCVVHLVSDEKEQLTSEALEAARVACNKYLTKYAGKEAYHIRIRAHPYHVVRINKMLSCAGADRLQTGMRHAYGKPQGTSARVAIGQVLMSVRCRDNHAEIAVEALRRAKFKFPGRQKILRSNKWGFTKWEREEYVKGRKEGWLQADGNSVKYIASHGPLK 235          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: A0A7R9U1D6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1D6_9STRA)

HSP 1 Score: 346 bits (887), Expect = 8.810e-119
Identity = 165/209 (78.95%), Postives = 183/209 (87.56%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLEKA 209
            MGRRPARCYRFQKNKP+IKSRYCRGVPDPKIRIYE GNK+  VD FP V HLVSDEKEQLTSEALEAARV ANKYM KYAGKD FH+R+R HPFH++RINKMLSCAGADRLQTGMRHAYGKP G +ARV+IGQII+SIR  D  +  A EALRRAKFKFPGRQKIL+SNKWGFT + R EYVQGR+EGW++KDGN  KY+++HGPL  A
Sbjct:   29 MGRRPARCYRFQKNKPYIKSRYCRGVPDPKIRIYECGNKRMGVDHFPYVIHLVSDEKEQLTSEALEAARVCANKYMVKYAGKDAFHLRVRCHPFHIIRINKMLSCAGADRLQTGMRHAYGKPMGVSARVAIGQIIMSIRCADKIKHLAREALRRAKFKFPGRQKILESNKWGFTPFDRSEYVQGRQEGWIEKDGNQAKYVSEHGPLAAA 237          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: A0A835YXV3_9STRA (Ribosomal protein L10e/L16 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXV3_9STRA)

HSP 1 Score: 337 bits (864), Expect = 1.020e-115
Identity = 161/208 (77.40%), Postives = 184/208 (88.46%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLEK 208
            MGRRPARC RFQKNKPFIKSRYCRGVPDPKIRI++ GNK ASVD+FP V HLVSDEKEQLTS ALEAARV+ANKY+ K+ GKD FH+RIRAHPFHV+R NKMLSCAGADRL +GMRH+YGKP  T ARVSIGQI++S+R+KD +  + +EALRRAKFKFPGRQKIL+S KWG TK+SRE+YV+GR+EGWL  DGN VKYI+QHGPL K
Sbjct:    1 MGRRPARCIRFQKNKPFIKSRYCRGVPDPKIRIFDCGNKAASVDLFPFVAHLVSDEKEQLTSNALEAARVTANKYLVKFGGKDAFHLRIRAHPFHVIRQNKMLSCAGADRLSSGMRHSYGKPTETAARVSIGQILMSVRAKDANGASCIEALRRAKFKFPGRQKILRSEKWGLTKWSREDYVRGRQEGWLVHDGNGVKYISQHGPLNK 208          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: A0A5D6Y3Y7_9STRA (Ribosomal_L16 domain-containing protein n=4 Tax=Pythium TaxID=4797 RepID=A0A5D6Y3Y7_9STRA)

HSP 1 Score: 331 bits (849), Expect = 2.100e-113
Identity = 161/206 (78.16%), Postives = 175/206 (84.95%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPL 206
            MGRRPA+CYRFQ  KPFIKSR+CRGVPDPKIRIY+VGNKKASVD FP V HLVSDEKEQL+SEALEAAR++AN+Y+ KYAGKDNFHMRIR HPF VLRINKMLSCAGADRLQTGMRHAYGKP G  ARV+IGQ IIS+RSKD +    VEALRRAKFKFPGRQK+L S KWGFTKY RE Y Q R +G L  DGN  KY+  HGPL
Sbjct:    1 MGRRPAKCYRFQNKKPFIKSRFCRGVPDPKIRIYDVGNKKASVDTFPFVAHLVSDEKEQLSSEALEAARIAANRYLSKYAGKDNFHMRIRCHPFQVLRINKMLSCAGADRLQTGMRHAYGKPAGVAARVAIGQPIISVRSKDQYGAAVVEALRRAKFKFPGRQKVLGSKKWGFTKYEREVYAQMRADGSLALDGNHEKYMPNHGPL 206          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: M4BZN7_HYAAE (Ribosomal_L16 domain-containing protein n=174 Tax=Oomycota TaxID=4762 RepID=M4BZN7_HYAAE)

HSP 1 Score: 331 bits (848), Expect = 2.500e-113
Identity = 162/207 (78.26%), Postives = 175/207 (84.54%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLE 207
            MGRRPA+CYRFQ  KPFIKSRYCRGVPDPKIRIY+VGNKKASVD FP V HLVSDEKEQL+SEALEAAR++AN+Y+ KY GKDNFHMRIR HPF VLRINKMLSCAGADRLQTGMRHAYGKP G  ARVSIGQ IIS+RSKD+  P+ VEALRRAKFKFPGRQK+L S KWGFTKY RE Y + R  G L  DGN  KY   HGPL+
Sbjct:    1 MGRRPAKCYRFQNKKPFIKSRYCRGVPDPKIRIYDVGNKKASVDTFPFVAHLVSDEKEQLSSEALEAARIAANRYLTKYCGKDNFHMRIRCHPFQVLRINKMLSCAGADRLQTGMRHAYGKPAGVAARVSIGQPIISVRSKDSFGPSVVEALRRAKFKFPGRQKVLGSKKWGFTKYERELYAEMRANGSLAVDGNHEKYKPNHGPLK 207          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: A0A6G0WLK8_9STRA (Ribosomal_L16 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLK8_9STRA)

HSP 1 Score: 330 bits (847), Expect = 4.540e-113
Identity = 160/210 (76.19%), Postives = 177/210 (84.29%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLEKAI 210
            MGRRPA+CYRFQ  KPFIKSRYCRGVPDPKIRIY++GNKKASVD FP V HLVSDEKEQL+SEALEAAR+SAN+Y+ K+ GKDNFHMRIR HPF VLRINKMLSCAGADRLQTGMRHAYGKP G  ARV+IGQ IIS+RSKD+  P  VEALRRAKFKFPGRQK+L S KWGFTKY R+ Y + R+EG L  DGN   Y   HGPL+K +
Sbjct:    1 MGRRPAKCYRFQNKKPFIKSRYCRGVPDPKIRIYDIGNKKASVDAFPFVAHLVSDEKEQLSSEALEAARISANRYLTKFCGKDNFHMRIRCHPFQVLRINKMLSCAGADRLQTGMRHAYGKPTGVAARVAIGQPIISVRSKDSFGPAVVEALRRAKFKFPGRQKVLGSKKWGFTKYERDTYAKMRQEGQLDYDGNHEIYRPAHGPLDKFL 210          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: F0WNC8_9STRA (60S ribosomal protein L10 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WNC8_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.020e-112
Identity = 160/207 (77.29%), Postives = 177/207 (85.51%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLE 207
            MGRRPA+CYRFQ  KPFI+SRYCRGVPD KIRIY+VGNKKASVD FP V HLVSDEKEQL++EALEAAR++AN+Y+ KY GKDNFHMRIR HPF VLRINKMLSCAGADRLQTGMRHAYGKP GT ARV+IGQ IIS+R+KDN  P  VEALRRAKFKFPGRQK+L S KWGFTKY REEY + R +G L  DGN  KY+  HGPL+
Sbjct:    1 MGRRPAKCYRFQNKKPFIRSRYCRGVPDSKIRIYDVGNKKASVDAFPYVAHLVSDEKEQLSAEALEAARIAANRYLVKYCGKDNFHMRIRCHPFQVLRINKMLSCAGADRLQTGMRHAYGKPAGTAARVAIGQPIISVRTKDNFGPACVEALRRAKFKFPGRQKVLGSKKWGFTKYEREEYAKLRADGTLIVDGNHEKYMPLHGPLK 207          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: A0A2R5GSQ0_9STRA (60S ribosomal protein L10 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSQ0_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.760e-107
Identity = 151/207 (72.95%), Postives = 175/207 (84.54%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLE 207
            M RRPARCYR+ KNKP+IKSRY RGVP+PK++IY+VG KKA VDVFP VCH+ SDE+EQ++SEALEAAR++ NKY+ K AGKD FHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKP G  ARV IGQI+IS+R+K    P A+EALRR+K KFPGRQKI+ S KWGFTKY   EYV+ RKEG+L  DGN  KY+ +HGPL+
Sbjct:    1 MARRPARCYRYCKNKPYIKSRYLRGVPEPKLKIYDVGAKKAGVDVFPAVCHMFSDEREQISSEALEAARIACNKYLVKNAGKDAFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPAGVVARVKIGQILISVRTKKQTLPVAMEALRRSKMKFPGRQKIVASKKWGFTKYDTAEYVRMRKEGFLIPDGNQAKYVPRHGPLK 207          
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Match: A0A7S0Q982_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q982_9EUKA)

HSP 1 Score: 314 bits (805), Expect = 1.590e-106
Identity = 149/208 (71.63%), Postives = 178/208 (85.58%), Query Frame = 0
Query:    1 MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVCHLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRINKMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVEALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYIAQHGPLEK 208
            MGRRPARC RFQKNKP+IKSR+CRGVPD KIRIY+ G KK +VDVFP V HLVSDEKEQLT+ ALEAARV+ NKY+ K  GK+ +H+R RAHP+HV+R NKMLSCAGADRL +GMRH+YGKP    AR+SIGQII+S+RSKD +    +EALRRAKFKFPGRQKI++SNKWGFTK+ RE+YV+GRKEGW++ DG SVKYIA+HG + +
Sbjct:   10 MGRRPARCVRFQKNKPYIKSRFCRGVPDSKIRIYDCGAKKTNVDVFPFVAHLVSDEKEQLTACALEAARVACNKYLVKNTGKEGYHIRTRAHPYHVIRQNKMLSCAGADRLSSGMRHSYGKPMEMAARISIGQIIVSVRSKDVNANHVIEALRRAKFKFPGRQKIMKSNKWGFTKFDREDYVKGRKEGWIRPDGCSVKYIAEHGRISE 217          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFF2_ECTSI5.550e-14595.73Ribosomal_L16 domain-containing protein n=2 Tax=Ec... [more]
A0A7S2Y043_9STRA1.520e-12583.09Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U1D6_9STRA8.810e-11978.95Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835YXV3_9STRA1.020e-11577.40Ribosomal protein L10e/L16 n=2 Tax=Tribonema minus... [more]
A0A5D6Y3Y7_9STRA2.100e-11378.16Ribosomal_L16 domain-containing protein n=4 Tax=Py... [more]
M4BZN7_HYAAE2.500e-11378.26Ribosomal_L16 domain-containing protein n=174 Tax=... [more]
A0A6G0WLK8_9STRA4.540e-11376.19Ribosomal_L16 domain-containing protein n=1 Tax=Ap... [more]
F0WNC8_9STRA1.020e-11277.2960S ribosomal protein L10 putative n=1 Tax=Albugo ... [more]
A0A2R5GSQ0_9STRA1.760e-10772.9560S ribosomal protein L10 n=1 Tax=Hondaea fermenta... [more]
A0A7S0Q982_9EUKA1.590e-10671.63Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3D3.90.1170.10Ribosomal protein L10e/L16coord: 1..211
e-value: 2.3E-105
score: 353.0
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILY54686Ribosomal protein L16p/L10ecoord: 4..173
IPR001197Ribosomal protein L10ePIRSFPIRSF005590RPL10a_RPL10ecoord: 1..182
e-value: 4.5E-89
score: 294.7
IPR001197Ribosomal protein L10eTIGRFAMTIGR00279TIGR00279coord: 1..174
e-value: 1.1E-74
score: 247.7
IPR001197Ribosomal protein L10ePANTHERPTHR1172660S RIBOSOMAL PROTEIN L10coord: 1..208
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 13..165
e-value: 7.0E-36
score: 123.2
IPR016180Ribosomal protein L10e/L16CDDcd01433Ribosomal_L16_L10ecoord: 43..165
e-value: 5.13477E-39
score: 128.378
NoneNo IPR availablePANTHERPTHR11726:SF1060S RIBOSOMAL PROTEIN L10coord: 1..208
IPR018255Ribosomal protein L10e, conserved sitePROSITEPS01257RIBOSOMAL_L10Ecoord: 108..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:368858..373837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.32.1mRNA_A-nodosum_M_contig96.32.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 368821..374653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.32.1 ID=prot_A-nodosum_M_contig96.32.1|Name=mRNA_A-nodosum_M_contig96.32.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=212bp
MGRRPARCYRFQKNKPFIKSRYCRGVPDPKIRIYEVGNKKASVDVFPMVC
HLVSDEKEQLTSEALEAARVSANKYMGKYAGKDNFHMRIRAHPFHVLRIN
KMLSCAGADRLQTGMRHAYGKPHGTTARVSIGQIIISIRSKDNHRPTAVE
ALRRAKFKFPGRQKILQSNKWGFTKYSREEYVQGRKEGWLQKDGNSVKYI
AQHGPLEKAIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036920Ribosomal_L10e/L16_sf
IPR001197Ribosomal_L10e
IPR016180Ribosomal_L10e/L16
IPR018255Ribosomal_L10e_CS