prot_A-nodosum_M_contig958.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig958.4.1
Unique Nameprot_A-nodosum_M_contig958.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length679
Homology
BLAST of mRNA_A-nodosum_M_contig958.4.1 vs. uniprot
Match: D7G202_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G202_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 8.000e-24
Identity = 115/390 (29.49%), Postives = 165/390 (42.31%), Query Frame = 0
Query:  149 ETAAKAQELQAKMRESREVQECLSREAREKRRDSIAYKNAAWAKERELKKKLEEARQQEGKMLMEGLNVFLEAKQRVREQRELTDKQERAWRAKAKKNEITLKQRQGVLATHNAHRIRRDQDLDQAALEKEAAEEKRLRRASAQWRRNEKALESVMKRGSAERTLDAKRLAKEI----------------------------------------CLPEEDRK-----------------------------------------------------------------------ARERELVNARKTEEEYRRLEHFGRRLYRXXXXXXXXXXXXXXXXXXXXXXXXVLESKMKEEDEELDRREALREVPLEKTKLEILEDIWSRQAHPAAA 427
            +T  +A+ LQ KM E RE+ E L++E R +RR+S+A+++AAW +ERE+KK   +AR+QE +++MEG  +F EAK RV++Q+E TDKQERAWRA     + +L +                       L++   EE+RLRR SAQW RN++ L+  +++GS  + LD  +LA E+                                         L EE+R+                                                                       A +R +   +K EEEYRR +    R  +                        V  SK +EE  ELDR E LR+ P +KTKLEILE +W+RQ HPAAA
Sbjct:  165 QTEKQARALQEKMGEQRELNERLAKEERARRRESLAHRSAAWEREREMKKSQRKARKQEQRLVMEGHELFREAKSRVKKQQERTDKQERAWRANRAYLDKSLDEGAEDXXXXXXXXXXXXXXXXXXXLDRAEEEERRLRRTSAQWGRNKQLLDREIEQGSG-KALDPFKLADELFQRAESRKEDAEYREAQKALWRESQQRHRRSEARRKVVGEALHEEEREREADLTASKEEGMRDVEAYRQECLRRDRESLDWHRQKFFDDRAVEEWTKGIAKAAETEDRELSELARLDSEAYKRRVEETQKLEEEYRRQQQIEGRFNKEDEELRMREQEAEERRVMLEDRESVSASKRREEQAELDRLEGLRDTPSDKTKLEILEAMWARQTHPAAA 553          
BLAST of mRNA_A-nodosum_M_contig958.4.1 vs. uniprot
Match: A0A6H5L5K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K2_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.200e-7
Identity = 91/343 (26.53%), Postives = 122/343 (35.57%), Query Frame = 0
Query:  196 LKKKLEEARQQEGKMLMEGLNVFLEAKQRVREQRELTDKQERAWRAKAKKNEITLKQRQGVLATHNAHRIRRDQDLDQAALEKEAAEEKRLRRASAQWRRNEKALESVMKRGSAERTLDAKRLAKEI----------------------------------------CLPEEDRK--------------------------------------------------------ARERELVN---------------ARKTEEEYRRLEHFGRRLYRXXXXXXXXXXXXXXXXXXXXXXXXVLESKMKEEDEELDRREALREVPLEKTKLEILEDIWSRQAHPAAA 427
            +KK   +AR+QE +++MEG               E TDKQERAWRA     + +L +                       L++   EE+RLRR SAQWRRN++ L+  ++RGS  + LD  +LA E+                                         L EE+R+                                                        A +REL                 A+K EEEYRR +    R Y+                        V  SK +EE  ELDR E LR+ P +KTKLEILE +W+RQ HPAAA
Sbjct:    1 MKKSQRKARKQEQRLVMEG-------------HEEQTDKQERAWRANRAYLDKSLDEGAEDKXXXXXXXXXXXXXXXXXXLDRAEEEERRLRRTSAQWRRNKQLLDREIERGSG-KALDPFKLADELFQRAESRKEDAEYREDQKALWRASQQRRRRSEARRKVVGEALQEEEREREANLTASKEEGMRDVEAYRQECLRRDRESLDWHRQKFFDDRAVEEWTKGIAKAAEAEDRELSELARLDCEAYKRRVEEAQKLEEEYRRQQQIEDRFYKEDEELRMREQEAEERRVMLEDRESVSASKRREEQAELDRLEGLRDTPSDKTKLEILEAMWARQTHPAAA 329          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig958.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G202_ECTSI8.000e-2429.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5K2_9PHAE1.200e-726.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 349..380
NoneNo IPR availableCOILSCoilCoilcoord: 154..174
NoneNo IPR availableCOILSCoilCoilcoord: 88..108
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..556
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 639..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..504

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig958contigA-nodosum_M_contig958:99881..136286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig958.4.1mRNA_A-nodosum_M_contig958.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig958 98783..136844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig958.4.1 ID=prot_A-nodosum_M_contig958.4.1|Name=mRNA_A-nodosum_M_contig958.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=679bp
MATTPSTTSTHDACEQDSRKPPASRQRTLGLASSSDDFENRSALTPGTGR
VAALATPARKGVAAAQGHRPHASLTPRQAAISARKQSEEQKKRDAVLLRQ
QREEMKNAAKANQAALFAHQQQTLRKRAVTAQRQRKAAAAAKKAAHERET
AAKAQELQAKMRESREVQECLSREAREKRRDSIAYKNAAWAKERELKKKL
EEARQQEGKMLMEGLNVFLEAKQRVREQRELTDKQERAWRAKAKKNEITL
KQRQGVLATHNAHRIRRDQDLDQAALEKEAAEEKRLRRASAQWRRNEKAL
ESVMKRGSAERTLDAKRLAKEICLPEEDRKARERELVNARKTEEEYRRLE
HFGRRLYRQEEEMRRKEQQARERRVMLEDRTSVLESKMKEEDEELDRREA
LREVPLEKTKLEILEDIWSRQAHPAAAAAARGRRRLRLEEVEELVSLEAP
VSPEAQTSGESGGVGKVFSESNGGCGGDGSGGFHSERDGSMSSSGSSNSS
GDFDTPGRLGVRSPEAHTSGESGGVGRVASEANGGCGPGEGGGFYRERTI
SDSSSGSSSSGSVFRISRRLSAHSSLDSLILECIERRIREGNGAVMSMFP
SSSDASMMEARGVAAGASAVLTVAERSFDGVKNPDQAGAVAMASAAAKNR
PPSGGPGHDHDEPGCYPVRALVFPETPT*
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