prot_A-nodosum_M_contig958.29.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig958.29.1
Unique Nameprot_A-nodosum_M_contig958.29.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length143
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: D7FWI4_ECTSI (Histone H2A n=3 Tax=Ochrophyta TaxID=2696291 RepID=D7FWI4_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 7.750e-78
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0 
Query:   10 SGKGXXXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKKRI 142
            SGKG  XXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKKRI
Sbjct:    2 SGKGGKXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKKRI 134
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: A0A7S2GSD6_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GSD6_9STRA)

HSP 1 Score: 213 bits (543), Expect = 6.830e-69
Identity = 120/134 (89.55%), Postives = 125/134 (93.28%), Query Frame = 0 
Query:    6 SSAQSGKGXXXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTK 139
            S A SGKG XXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGR+HRFLK  V   QRVGAT+AVYT+AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSL+NK +K
Sbjct:   13 SCAMSGKGGXXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRVHRFLKHSVQQSQRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKQSK 146
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: A0A7S2LGK2_9STRA (Histone H2A n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGK2_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.060e-68
Identity = 118/130 (90.77%), Postives = 124/130 (95.38%), Query Frame = 0 
Query:   10 SGKGXXXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTK 139
            SGKG  XXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGR+HRFLK+ V S QRVGAT+AVYT+AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSL+NK+ K
Sbjct:    2 SGKGGKXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRVHRFLKTSVMSSQRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSNK 131
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: F0XY44_AURAN (Histone H2A n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XY44_AURAN)

HSP 1 Score: 211 bits (536), Expect = 4.700e-68
Identity = 116/132 (87.88%), Postives = 126/132 (95.45%), Query Frame = 0 
Query:   10 SGKGXXXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKKR 141
            SGKG  XXXXXXXXXAPTSKKAPQ++S KAGLQFPVGR+HRFLK RV + QRVGAT+AVYTAAILEYLTAEVLELAGNACKDLK+KRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSL+NK++KK+
Sbjct:    2 SGKGGKXXXXXXXXXAPTSKKAPQTKSLKAGLQFPVGRLHRFLKLRVTASQRVGATAAVYTAAILEYLTAEVLELAGNACKDLKMKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSSKKK 133
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: B7G2A5_PHATC (Histone H2A n=4 Tax=Bacillariophyta TaxID=2836 RepID=B7G2A5_PHATC)

HSP 1 Score: 209 bits (533), Expect = 1.440e-67
Identity = 116/131 (88.55%), Postives = 122/131 (93.13%), Query Frame = 0 
Query:   10 SGKGXXXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKK 140
            SGKG  XXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGR+HRFLK+ VH   RVGAT+AVYT+AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELD LIKATIAGGGVIPHIHKSL+NK+  K
Sbjct:    2 SGKGGKXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRVHRFLKNSVHQGHRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDALIKATIAGGGVIPHIHKSLINKSQGK 132
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: B8BS24_THAPS (Histone H2A (Fragment) n=9 Tax=Bacillariophyta TaxID=2836 RepID=B8BS24_THAPS)

HSP 1 Score: 207 bits (526), Expect = 1.290e-66
Identity = 104/116 (89.66%), Postives = 109/116 (93.97%), Query Frame = 0 
Query:   25 APTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKK 140
            APT KKAPQSRSSKAGLQFPVGR+HRFLK  V   QRVGAT+AVYT+AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSL+NK+T K
Sbjct:   10 APTIKKAPQSRSSKAGLQFPVGRVHRFLKKSVQQSQRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSTGK 125
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: K0TER1_THAOC (Histone H2A n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER1_THAOC)

HSP 1 Score: 208 bits (530), Expect = 1.800e-66
Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0 
Query:   10 SGKGXXXXXXXXXXXAPTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKK 140
            SGKGXXXXXXXXXXXAPT KKAPQSRSSKAGLQFPVGR+HRFLK+ V   QRVGAT+AVYT+AILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSL+NK+  K
Sbjct:   47 SGKGXXXXXXXXXXXAPTIKKAPQSRSSKAGLQFPVGRVHRFLKNSVQQSQRVGATAAVYTSAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKSQGK 177
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: A0A835Z1F5_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F5_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.760e-66
Identity = 104/112 (92.86%), Postives = 108/112 (96.43%), Query Frame = 0 
Query:   29 KKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKK 140
            KKAPQSRS +AGLQFPVGRIHRFLKSRV + QRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSL++KT KK
Sbjct:   28 KKAPQSRSQRAGLQFPVGRIHRFLKSRVQTQQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLISKTQKK 139
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: A0A482SNT5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNT5_9ARCH)

HSP 1 Score: 206 bits (525), Expect = 3.890e-66
Identity = 102/112 (91.07%), Postives = 109/112 (97.32%), Query Frame = 0 
Query:   26 PTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKT 137
            P SK+APQSRSS+AGLQFPVGRIHRFLK+RVHS QRVGAT+AVYT+AI+EYLTAEVLELAGNACKDLKVKRITPRHL LAIRGDEELDTLIKATIAGGGVIPHIHKSL+NKT
Sbjct:   25 PASKRAPQSRSSRAGLQFPVGRIHRFLKARVHSQQRVGATAAVYTSAIMEYLTAEVLELAGNACKDLKVKRITPRHLLLAIRGDEELDTLIKATIAGGGVIPHIHKSLINKT 136
[Close]
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Match: A0A7S3PQG1_9STRA (Histone H2A n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQG1_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.240e-65
Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 0 
Query:   26 PTSKKAPQSRSSKAGLQFPVGRIHRFLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKKR 141
            PTSKKAPQSRSS+AGLQFPVGR+HRFLK+R+ S  RVGAT+AVYTAAILEYLTAEVLELAGNA KDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNK  K +
Sbjct:   15 PTSKKAPQSRSSRAGLQFPVGRVHRFLKARISSKNRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKGKKTK 130
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig958.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI4_ECTSI7.750e-7898.50Histone H2A n=3 Tax=Ochrophyta TaxID=2696291 RepID... [more]
A0A7S2GSD6_9STRA6.830e-6989.55Histone H2A n=1 Tax=Helicotheca tamesis TaxID=3740... [more]
A0A7S2LGK2_9STRA1.060e-6890.77Histone H2A n=1 Tax=Leptocylindrus danicus TaxID=1... [more]
F0XY44_AURAN4.700e-6887.88Histone H2A n=2 Tax=Pelagomonadales TaxID=54409 Re... [more]
B7G2A5_PHATC1.440e-6788.55Histone H2A n=4 Tax=Bacillariophyta TaxID=2836 Rep... [more]
B8BS24_THAPS1.290e-6689.66Histone H2A (Fragment) n=9 Tax=Bacillariophyta Tax... [more]
K0TER1_THAOC1.800e-6690.08Histone H2A n=1 Tax=Thalassiosira oceanica TaxID=1... [more]
A0A835Z1F5_9STRA3.760e-6692.86Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A482SNT5_9ARCH3.890e-6691.07Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3PQG1_9STRA3.240e-6588.79Histone H2A n=1 Tax=Aplanochytrium stocchinoi TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 117..135
score: 52.13
coord: 31..53
score: 68.94
coord: 76..89
score: 84.01
coord: 61..76
score: 65.77
coord: 90..104
score: 65.78
IPR002119Histone H2ASMARTSM00414h2a4coord: 20..140
e-value: 1.3E-69
score: 247.2
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 15..138
IPR002119Histone H2ACDDcd00074H2Acoord: 29..136
e-value: 1.89851E-58
score: 175.216
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 21..109
e-value: 1.8E-18
score: 67.1
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 15..142
e-value: 5.6E-58
score: 196.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 15..117
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 110..140
e-value: 2.7E-13
score: 49.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR23430:SF300HISTONE H2Acoord: 15..138
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 39..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig958contigA-nodosum_M_contig958:258923..259351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig958.29.1mRNA_A-nodosum_M_contig958.29.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig958 258060..259809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig958.29.1 ID=prot_A-nodosum_M_contig958.29.1|Name=mRNA_A-nodosum_M_contig958.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=143bp
MHFVTSSAQSGKGGKGGKGGKGGKAPTSKKAPQSRSSKAGLQFPVGRIHR
FLKSRVHSHQRVGATSAVYTAAILEYLTAEVLELAGNACKDLKVKRITPR
HLQLAIRGDEELDTLIKATIAGGGVIPHIHKSLVNKTTKKRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS