prot_A-nodosum_M_contig955.4.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A182GR78_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR78_AEDAL) HSP 1 Score: 110 bits (276), Expect = 3.580e-26 Identity = 62/159 (38.99%), Postives = 90/159 (56.60%), Query Frame = 0
Query: 21 DGGTEMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVEEKATKI----------LAASGVPTLSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
DG T + + ++VDD+L+ D + L Q K+KD+G + +G I+RNR+ +L LDQ Y+EE + A SGV L K+ P+ EE+ EMRN PY++AVG L + A TRPDIA ++ AV +F NPG H +AV +I+
Sbjct: 3 DGETMLFVTIYVDDLLIFTNDGRLKKKLKQFLMQNFKMKDLGPATHCLGIRIKRNRREGKLSLDQQAYIEEIVRRFGMENAYSIATPADSGV-RLEKSMAPKTEEEEMEMRNVPYKEAVGCLSFVAQTTRPDIAFAVNAVSQFSSNPGKPHWEAVKRII 160
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: G4TZM0_SERID (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TZM0_SERID) HSP 1 Score: 106 bits (265), Expect = 1.410e-24 Identity = 55/154 (35.71%), Postives = 91/154 (59.09%), Query Frame = 0
Query: 25 EMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVEE--KATKILAASGV-------PTLSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
++++ VHVDD+L+ +K + EL + K+ D G T + +G + R+R+++ + L Q Y+E+ + K+ +G P LS D P+ +EK EMRN PYR+A+G L++ AT TRPDI+ ++ + F KNPG AH A+ ++L
Sbjct: 66 KIIVPVHVDDLLLASKSSEAIQMVKDELKARFKIHDQGPTSFLLGVKLERDRQSHTISLSQPAYIEQILETYKMQDCNGADTPMAEKPLLSTKDSPQTEQEKLEMRNVPYREALGKLIYLATATRPDISYAVGVLCWFSKNPGQAHWLALKRVL 219
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A182HAB7_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAB7_AEDAL) HSP 1 Score: 104 bits (260), Expect = 2.210e-23 Identity = 55/178 (30.90%), Postives = 98/178 (55.06%), Query Frame = 0
Query: 1 MTAIGLEQAKVGLCVFRKVVDGGTEMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVEEKATKILAASGVPT---------LSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
+ A GL ++ + C++ + + G + + ++VDD LV D+ + L + K+K++G+ + +G I R+R +L LDQ Y+++ + + P L K+ P+ PEE EM+N P+++AVG+L++ A TRPDIA ++ V +F NPG H +AV +I+
Sbjct: 70 LKAFGLIRSNLDPCLYFILKEDGKMLFVTIYVDDFLVFTNDEELKKKLKCYLNSRFKMKNIGEAKFCLGLQITRDRTNGKLFLDQQAYIKDVLKRFNMENSKPVATPMDSNVKLDKSRGPKTPEEMAEMKNVPFKEAVGSLLYAAQATRPDIAFAVNLVSQFSINPGRQHWEAVKRIM 247
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI) HSP 1 Score: 105 bits (263), Expect = 2.380e-23 Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 0
Query: 14 CVFRKVVDGGTEMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVE----------EKATKILAASGVPTLSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
CV+++ G T + +V++VDDIL+ D M L ++ +KD+G+ Y +G I R+R L L Q +Y++ K + +GV TLS+ D P+ PEE+E M PY AVGA+M+T T TRPD+A ++ R+ NPG H K V IL
Sbjct: 490 CVYKRF-SGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTIL 653
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI) HSP 1 Score: 105 bits (263), Expect = 2.490e-23 Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 0
Query: 14 CVFRKVVDGGTEMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVE----------EKATKILAASGVPTLSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
CV+++ G T + +V++VDDIL+ D M L ++ +KD+G+ Y +G I R+R L L Q +Y++ K + +GV TLS+ D P+ PEE+E M PY AVGA+M+T T TRPD+A ++ R+ NPG H K V IL
Sbjct: 884 CVYKRF-SGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTIL 1047
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A0J7KUH3_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KUH3_LASNI) HSP 1 Score: 100 bits (248), Expect = 1.300e-22 Identity = 56/173 (32.37%), Postives = 92/173 (53.18%), Query Frame = 0
Query: 6 LEQAKVGLCVFRKVVDGGTEMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVEEKATKILAASGVPT---------LSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
L Q+K C++ + +V+ ++VDD+ V D A MD A L ++ ++ D+G+ +++G I +N EL LDQ Y+ + + + P L+K P + E +EMRN PYR+A+G+L++ + RPDIA ++ V RFC+ P H AV +IL
Sbjct: 64 LIQSKANPCIYYRKTKSFL-LVLDIYVDDMFVLTNDDAMMDAVKARLSEQFRMTDLGEARHFLGIRISKNEATGELYLDQETYLRKVLERYGMSDCKPVSTPCDPNQKLTKKQMPMDSAEAKEMRNVPYREAIGSLLYASQGARPDIAYAVNLVSRFCQEPRRIHWTAVKRIL 235
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE) HSP 1 Score: 102 bits (254), Expect = 3.850e-22 Identity = 58/173 (33.53%), Postives = 91/173 (52.60%), Query Frame = 0
Query: 5 GLEQAKVGLCVFRKVVDGGTEMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVEEKA--------TKILAASGVPTLSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
G EQ K CVFRK+VD M++V+HVDDILV D+ + A ++ K++G+ ++ GC I R+ A LK+ Q Y++ ++I A+ GV K D+ E+ +P R+ +G++MW +T +RPD+ ++R V R P H A+ KIL
Sbjct: 477 GFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSDE-DCEELLASFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRDD-------EKAGEWPVRETIGSMMWVSTFSRPDVLFAVRGVARHAHAPAKRHWDAIQKIL 641
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A2P6R3C5_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R3C5_ROSCH) HSP 1 Score: 101 bits (251), Expect = 9.550e-22 Identity = 63/182 (34.62%), Postives = 99/182 (54.40%), Query Frame = 0
Query: 1 MTAIGLEQAKVGLCVFRKVVDGGTEMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVEEKATKIL--------AASGVPT-----LSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
+++ G + V CV+ KV G + +V++VDDIL+ + + A ++ L +KD+G+ Y +G I+R+RK + L L Q Y+ TKIL + + VP L+K + P E+EEM+N PY + VG+LM+ TRPD+A ++ + RF NPG AH A K+L
Sbjct: 397 ISSFGFVENMVDECVYMKV-SGSQFIFLVLYVDDILLASSNFALLNETKKFLSMNFDMKDLGEASYVLGIEIKRDRKKHLLGLSQQSYI----TKILRRFEMQNCSGNDVPMAKGDKLTKLETPMTELEREEMKNKPYSRLVGSLMYAQVCTRPDLAFAVGMLARFQSNPGNAHWIAGKKVL 573
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR) HSP 1 Score: 100 bits (250), Expect = 9.790e-22 Identity = 58/165 (35.15%), Postives = 92/165 (55.76%), Query Frame = 0
Query: 14 CVFRKVVDGGTEMVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVE--------EKATKILAASGVP-TLSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
CV++K+ G + + +V++VDDIL+ D +M L ++ +KD+G+ Y +G I R+R L L Q +Y++ EK+ + G+ +LS+ + P+ EE+E M PY AVGA+M+T T TRPD+A ++ R+ NPG H K V IL
Sbjct: 273 CVYKKI-SGSSIIFLVLYVDDILLFGNDIPSMQSTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGVSLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTIL 436
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Match: A0A182HAB6_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAB6_AEDAL) HSP 1 Score: 97.8 bits (242), Expect = 2.780e-21 Identity = 50/153 (32.68%), Postives = 85/153 (55.56%), Query Frame = 0
Query: 26 MVMVVHVDDILVHAKDQATMDRFAAELGQKLKLKDMGDTGYYMGCHIRRNRKAYELKLDQHLYVEEKATKILAASGVPT---------LSKADEPRNPEEKEEMRNFPYRKAVGALMWTATMTRPDIACSIRAVVRFCKNPGPAHKKAVMKIL 169
+ + ++VDD LV KD+ + L + K+K++G+ + +G I +R +L LDQ Y+++ + + P L K+ P+ PEE EM+N P+++AVG+L++ A TRPDIA ++ V +F NPG H +AV +I+
Sbjct: 2 LFVTIYVDDFLVFTKDEELKKKLKCYLNSRFKMKNIGEAKFCLGLQITHDRTNGKLFLDQQAYIKDVLKRFNMENSKPVATPMDSNVKLDKSRGPKTPEEMAEMKNVPFKEAVGSLLYAAQATRPDIAFAVNLVSQFSINPGRQHWEAVKRIM 154 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig955.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig955.4.1 ID=prot_A-nodosum_M_contig955.4.1|Name=mRNA_A-nodosum_M_contig955.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=170bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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