prot_A-nodosum_M_contig954.4.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig954.4.2
Unique Nameprot_A-nodosum_M_contig954.4.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length145
Homology
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BLAST of mRNA_A-nodosum_M_contig954.4.2 vs. uniprot
Match: A0A6H5K8M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 4.160e-12
Identity = 45/73 (61.64%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:    1 MPSEEDPSIAS----NSASMMEALLQSITDDPCPFQAPSAAPPSRPVRSARRKRKGNPFAALGGDSESDESDT 69
            MPSE + S+AS    +SA M+EALLQSITD+P P      APPSRPVRSA RKRKGNPFAAL  D    +SD+
Sbjct:  131 MPSEGEVSMASLRASSSARMVEALLQSITDEPAPD-----APPSRPVRSAGRKRKGNPFAALEDDGSDSDSDS 198
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BLAST of mRNA_A-nodosum_M_contig954.4.2 vs. uniprot
Match: D7G3V9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V9_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 4.540e-12
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 0 
Query:    1 MPSEEDPSIAS----NSASMMEALLQSITDDPCPFQAPSAAPPSRPVRSARRKRKGNPFAALGGD 61
            MPSE + S+AS    +SA M+EALLQSITD+P P      APPSRPVRSA RKRKGNPFAALG D
Sbjct:   68 MPSEGEVSMASLRASSSARMVEALLQSITDEPAPD-----APPSRPVRSAGRKRKGNPFAALGDD 127
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig954.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K8M6_9PHAE4.160e-1261.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3V9_ECTSI4.540e-1267.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig954contigA-nodosum_M_contig954:40068..41090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig954.4.2mRNA_A-nodosum_M_contig954.4.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig954 39198..50493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig954.4.2 ID=prot_A-nodosum_M_contig954.4.2|Name=mRNA_A-nodosum_M_contig954.4.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=145bp
MPSEEDPSIASNSASMMEALLQSITDDPCPFQAPSAAPPSRPVRSARRKR
KGNPFAALGGDSESDESDTNESRHWGVGRGLAGKNRKVQGLAFAPPSGFS
GFSSVPGAAFSGWSTKVGGGSGDTGPWNARAPVASDDDLDDPAL*
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