prot_A-nodosum_M_contig953.33.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig953.33.1
Unique Nameprot_A-nodosum_M_contig953.33.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length108
Homology
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BLAST of mRNA_A-nodosum_M_contig953.33.1 vs. uniprot
Match: A0A6H5L2J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J7_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 7.680e-8
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:    1 MYSGPLGNLMTLRGLLKIFRDADLRRRAGLTSAEIKEVFSQANASLKSHAG 51
            +YSGPL   MTLRGLL++ RDA L+ R GLTS ++K +F QANA L+S  G
Sbjct:  682 IYSGPLLVPMTLRGLLRMARDAGLQERVGLTSEDVKRIFKQANAFLQSRDG 732
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BLAST of mRNA_A-nodosum_M_contig953.33.1 vs. uniprot
Match: D7FIY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIY9_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.260e-6
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:    2 YSGPLGNLMTLRGLLKIFRDADLRRRAGLTSAEIKEVFSQANASLKSHAG 51
            +SGP    MTLRGLL++ RDA L+ R GLTS ++K++F QANA L+S  G
Sbjct:  654 FSGPSLEPMTLRGLLRMARDAGLQERVGLTSEDVKKMFKQANAFLQSRDG 703
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig953.33.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2J7_9PHAE7.680e-858.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIY9_ECTSI1.260e-656.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig953contigA-nodosum_M_contig953:279592..280731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig953.33.1mRNA_A-nodosum_M_contig953.33.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig953 279592..280751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig953.33.1 ID=prot_A-nodosum_M_contig953.33.1|Name=mRNA_A-nodosum_M_contig953.33.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=108bp
MYSGPLGNLMTLRGLLKIFRDADLRRRAGLTSAEIKEVFSQANASLKSHA
GAESQGVPQSYSCIYEAPSEDKDVEASSETSDSTRLAEPGRSTTTTAPAV
DLELLDQE
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