prot_A-nodosum_M_contig953.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig953.17.1
Unique Nameprot_A-nodosum_M_contig953.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length290
Homology
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BLAST of mRNA_A-nodosum_M_contig953.17.1 vs. uniprot
Match: D7FIZ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ7_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 1.250e-108
Identity = 176/285 (61.75%), Postives = 212/285 (74.39%), Query Frame = 0 
Query:    7 NVVAMALAALLPIAVIVGIVLGGRGEHGPWHNRSYGRRGARPGFSGRRLQS-TSKFATQLEMTVCLTDDHTSESASSTADQWKTAIVGFFSIDNEDYVQVDDSVTRCEVDDWQRRISIYNEADENGTAADVASNQVDSIYPNTDEKTTEFFTSVSTSIDEQDVELAAPEASDFELLSLGFLVIWLDSNGDVVSSQGTTEDRDVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAEAEMQSQ-VGKEVGTPAPPSATSTNPYGAG-TAEEYKTGK 288
             +V  ALAAL+P+ V++G+   G G +G       G        +GRRLQ+ T  FATQLEMT+CLT++HTS+SA+ST DQ K A++  F I++ D V VDDS+TRC VD+WQRR+SIYN ADE G+AAD+AS QVD IYP     TT F   ++TSI+ QD EL     +D +LLSLGFLVIWLDSNGDVV +QGTT  +DVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAE +      GK++G PAPPSATS+NPYG   +AEE K+GK
Sbjct:    9 KLVLKALAALIPLMVLIGVSTSGNGMNGATSKAVDG--------AGRRLQTATYDFATQLEMTICLTEEHTSDSATSTTDQLKVAVMEIFGIESADDVVVDDSLTRCTVDNWQRRVSIYNRADETGSAADIASAQVDQIYPGA--LTTAFLDDIATSINAQDAELVFT-GTDLDLLSLGFLVIWLDSNGDVVDNQGTTTSKDVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEAELDSYGGGSGKDMGAPAPPSATSSNPYGGNYSAEENKSGK 282
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BLAST of mRNA_A-nodosum_M_contig953.17.1 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 8.400e-8
Identity = 42/167 (25.15%), Postives = 87/167 (52.10%), Query Frame = 0 
Query:   85 DQWKTAIVGFFSIDNEDYVQVDDSVTRCEVDDW------QRRISIYNEADENGTAADVASNQVDSIYPNTDEKTTEFFTSVSTSIDEQDVELAAPEASDFELLSLGFLVIWLDSNGDVVSSQGTTEDRDVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWR 245
            D  +  I+  F ++ E       +V + EV ++      +  I+I NE  +  +AA +++ Q++ +      +++EF T +++S+++ ++ +     +     SLG++V++ D +  V ++   + D D V   G D WWPW   L++  V+LCCICP+    + +R
Sbjct:  228 DALRAGIMDVFEVEQEQTEGTTGTVEKREVTEFCDDGSEEWTIAIGNEPSDTQSAAVISAGQMELV------RSSEFTTLLASSLEDSNLSV---NPAGLTYSSLGYIVLY-DEDQAVTTANSDSLDSDFVAFRGPDQWWPWXXXLLFGLVLLCCICPLAACIYYYR 384
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig953.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIZ7_ECTSI1.250e-10861.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JL50_9PHAE8.400e-825.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig953contigA-nodosum_M_contig953:86895..103901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig953.17.1mRNA_A-nodosum_M_contig953.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig953 86762..105279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig953.17.1 ID=prot_A-nodosum_M_contig953.17.1|Name=mRNA_A-nodosum_M_contig953.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=290bp
MTGSGRNVVAMALAALLPIAVIVGIVLGGRGEHGPWHNRSYGRRGARPGF
SGRRLQSTSKFATQLEMTVCLTDDHTSESASSTADQWKTAIVGFFSIDNE
DYVQVDDSVTRCEVDDWQRRISIYNEADENGTAADVASNQVDSIYPNTDE
KTTEFFTSVSTSIDEQDVELAAPEASDFELLSLGFLVIWLDSNGDVVSSQ
GTTEDRDVVNIGGTDVWWPWWAWLIYAAVVLCCICPMLFFFFKWRRDKEA
EAEMQSQVGKEVGTPAPPSATSTNPYGAGTAEEYKTGKA*
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