prot_A-nodosum_M_contig953.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig953.15.1
Unique Nameprot_A-nodosum_M_contig953.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length487
Homology
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BLAST of mRNA_A-nodosum_M_contig953.15.1 vs. uniprot
Match: D7FIZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ6_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.900e-85
Identity = 190/452 (42.04%), Postives = 257/452 (56.86%), Query Frame = 0 
Query:   45 AARSQSFTTSTKSLLGRCGVLVTTAATFVITVVLSTG---NMTPAVSTTTLFPVGGQSLYASRGRRHDISIVGA---------GRALQEEEDTAVI----YETELQLFLCNPSLVEEENDAYLVDNESVAMALSRILVLGQSDPDDIEVTIKTGPLDAGDDAYMCNTDGMLQWHAKIHYGADDAVALETTPAVMAAKANDFIAYSSSDFKILLSAFINDEYTTNAQAVDVSAEDIVVSNVGWTVTFPSQAPSVREAETTRTLFGFEIGVMDDAGLWNWWVWLVFALLLACFMAPVCCXXLCRRRGDTGATKEELETAQDGRRKGDSPEAVRDPEWGPNELGLEEEEDYHRNQXXXXXXXXXXXXLHDGRGVEPASNRPGRRSGQ------ALIQETGERSTWAQPAQSSSRSPLRSKRRPVARHLNVQGQDEDGGDRGMATSRSKPRQNSPD 474
            AAR+ S  +S    + R   LV  AA  V TV  S G   + + + + T    VG QSLYAS   R  IS+  A         GR LQEE  T +     Y T+LQ+F+CNPSL  E NDA+LVD  S+A ALS I  + Q+D  DI VTIKT P+D  D +YMC+TDGMLQWHA++ Y A  A + +TTPAV+AA+AND++AYSSS FK LL+ FIN EY    + V++SA+DI++  VGW VTFP++    +E  T  +  G  +G+  D+ LW WWVWL++ALL+AC       XX      +  A ++ L   + GR + +    +R PEWG  EL  E + D +++Q               GRGVEP + RP  R+GQ      A +QE G++S WAQP+ +SSR      + PV R  ++   D+D  D G+   RSK  Q S D
Sbjct:    3 AARASS--SSLNPWVARNWGLVIAAAATVATVAFSLGTTASTSRSGAMTGSARVGQQSLYASPKSRGGISVAQAQRPSSVRPHGRVLQEETPTVITPIVEYGTKLQIFMCNPSLEVEGNDAHLVDEASLAAALSNISGIKQADEGDITVTIKTEPVDVDDVSYMCDTDGMLQWHAQVEYSAAYAGSRDTTPAVLAAQANDYVAYSSSQFKALLAGFINAEYAGEVETVELSADDILIPTVGWIVTFPAEESVTQETHTAGSSDGLAMGIGSDSSLWAWWVWLIYALLVACXXXXXXXXXXXXXADEKEAARDRLIATRKGRGE-EGLAKIRGPEWGITELDFEGDYDAYQSQEMKREYDGA------GRGVEPTAYRPSHRAGQQSVSAQAWMQEAGKKSAWAQPSGNSSRQG--GGQSPVVRRFDI---DDDDADDGVGKLRSKHPQYSFD 440
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig953.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIZ6_ECTSI1.900e-8542.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig953contigA-nodosum_M_contig953:79151..86145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig953.15.1mRNA_A-nodosum_M_contig953.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig953 78588..86466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig953.15.1 ID=prot_A-nodosum_M_contig953.15.1|Name=mRNA_A-nodosum_M_contig953.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=487bp
MSGAYYDDESSRVRAGRGDDVPRINGGPKPRGVITARVVRSIPTAARSQS
FTTSTKSLLGRCGVLVTTAATFVITVVLSTGNMTPAVSTTTLFPVGGQSL
YASRGRRHDISIVGAGRALQEEEDTAVIYETELQLFLCNPSLVEEENDAY
LVDNESVAMALSRILVLGQSDPDDIEVTIKTGPLDAGDDAYMCNTDGMLQ
WHAKIHYGADDAVALETTPAVMAAKANDFIAYSSSDFKILLSAFINDEYT
TNAQAVDVSAEDIVVSNVGWTVTFPSQAPSVREAETTRTLFGFEIGVMDD
AGLWNWWVWLVFALLLACFMAPVCCCCLCRRRGDTGATKEELETAQDGRR
KGDSPEAVRDPEWGPNELGLEEEEDYHRNQDEKKRDRHGHGHLHDGRGVE
PASNRPGRRSGQALIQETGERSTWAQPAQSSSRSPLRSKRRPVARHLNVQ
GQDEDGGDRGMATSRSKPRQNSPDKRVRSGRHGQSY*
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