prot_A-nodosum_M_contig945.13.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig945.13.1
Unique Nameprot_A-nodosum_M_contig945.13.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length370
Homology
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BLAST of mRNA_A-nodosum_M_contig945.13.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.520e-5
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:    1 MVNVYS-RKCRTEGCGKQPSYGVTGTKTAEYCAQHAPDGMV 40
            MV++++ R+C  E C K P+YGV GT+ AE+CA HA DGMV
Sbjct:    8 MVDIHNIRRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMV 48
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig945.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBM3_9PHAE1.520e-556.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 47..81
e-value: 1.3E-6
score: 28.8
coord: 199..233
e-value: 1.2E-8
score: 35.4
coord: 9..43
e-value: 2.2E-9
score: 37.7
coord: 165..195
e-value: 1.2E-5
score: 25.8
coord: 123..157
e-value: 6.9E-8
score: 32.9
coord: 85..119
e-value: 1.9E-6
score: 28.3
NoneNo IPR availableGENE3D6.10.140.110coord: 100..164
e-value: 1.3E-10
score: 43.4
coord: 25..89
e-value: 7.5E-13
score: 50.5
coord: 177..238
e-value: 2.2E-11
score: 45.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig945contigA-nodosum_M_contig945:181482..183278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig945.13.1mRNA_A-nodosum_M_contig945.13.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig945 181029..183730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig945.13.1 ID=prot_A-nodosum_M_contig945.13.1|Name=mRNA_A-nodosum_M_contig945.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=370bp
MVNVYSRKCRTEGCGKQPSYGVTGTKTAEYCAQHAPDGMVDVKSRKCRTE
GCGKHPSYGVAGTKTAEYCAQHGLNGMVNVYSRKCRSESCGEVPSFGVTG
TKTAEYCTRHAPDGMVDVKSRKCRTESCKKCPSFGVAGTKTVEDCAQHAP
DGMVDVKSRKYRTEGCGKQASLGAAGTKTGEYCSQHAPDKMVNVYNKKCR
TEGCGKRPSYGVAGTETAEYCTQHAPDGMVDVKSLQCRTRGCGRKPSFEV
GNTRTAEYSTQHACLKCGVGGYREGEVDPHHSGKETIGNIRPNGVECQIV
HPPANTNPPSEGSQGSRKRERYPEVMSTASMRPISRESAGRAGTMQDIDG
KRPPVERDSSVKVEVQLSM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys