prot_A-nodosum_M_contig944.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig944.16.1
Unique Nameprot_A-nodosum_M_contig944.16.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length232
Homology
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 2.440e-63
Identity = 120/229 (52.40%), Postives = 150/229 (65.50%), Query Frame = 0
Query:    4 LGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFRVHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANMESGPFRIRTPDKP-QVDPVPYDDAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRK 231
            L V V+ C AHRLN+V +W LGI G++ T  +  M  LM++LAA V  FSHSAVNN ELK +Q L  +F  IYELIRRNDTRW +Q  MM RLL LK A+VEYFR + ++ R+LS REW++TNEVCS+LD VAEV  K+QGA DT+ISQ  F M E+        ++IR PD+P   D V  +  +  DL  E     +V +  M KK LG    P+ERI  LLDPRRK
Sbjct:   40 LDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRK 268          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 4.830e-61
Identity = 120/229 (52.40%), Postives = 150/229 (65.50%), Query Frame = 0
Query:    4 LGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFRVHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANMESGPFRIRTPDKP-QVDPVPYDDAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRK 231
            L V V+ C AHRLN+V +W LGI G++ T  +  M  LM++LAA V  FSHSAVNN ELK +Q L  +F  IYELIRRNDTRW +Q  MM RLL LK A+VEYFR + ++ R+LS REW++TNEVCS+LD VAEV  K+QGA DT+ISQ  F M E+        ++IR PD+P   D V  +  +  DL  E     +V +  M KK LG    P+ERI  LLDPRRK
Sbjct:  368 LDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRK 596          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.880e-58
Identity = 114/234 (48.72%), Postives = 152/234 (64.96%), Query Frame = 0
Query:    3 ALGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFRVHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANMESGPFRIRTPDKPQV----DPVPYDDAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRKT 232
            ALGV VV C  HRLNT VVW LGI G      +  MG LM+KLAA V  FSHSAVNN ELK LQ L   FS+IYEL+RRNDTRWT+Q  MMDR+L LK  + EYF+ +  ++R+L+  EW+ITNEVCS+L  V+EV  ++QG+ DT++ QA F++ EL+  +      IR P+   +    + +P DD +  DL  E +  ++V    M +K +G     VER+S L+DPRRK+
Sbjct:  379 ALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKS 610          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 6.930e-57
Identity = 111/234 (47.44%), Postives = 150/234 (64.10%), Query Frame = 0
Query:    3 ALGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFRVHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANMESGPFRIRTPDKPQV----DPVPYDDAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRKT 232
            ALGV VV C  HRLNT VVW LGI G      +  MG LM+KLAA V  FSHSAVNN ELK LQ L   FS+IYEL+R NDTRWT+Q  MMDR+L LK  + EYF+ +  ++R+L+  EW+ITNEVCS+L  V+EV  ++QG+ DT++ QA F++ EL+  +      IR P+   +    + +P DD +  DL  E +  ++V    M +K +G     VER+S L+DPR ++
Sbjct:  184 ALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRS 415          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 4.540e-56
Identity = 117/258 (45.35%), Postives = 158/258 (61.24%), Query Frame = 0
Query:    3 ALGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFRVHASD-------KRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANMESG--PFRIR----TPDKPQVDPVPYD---------------DAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRKT 232
            ALGV VV C  HR+N+ V+W LGI G+V TC++KPM    +KLAA V  FSHSAVNN  LK LQ L     +IYE IRRNDTRWT+Q+ MM RLL+LK  + EYFR  A         KR+L+  EW++TNEVCS+L+ V+EV  ++QGA DT++SQATF++ E++  + +   P R+     TP  P    +P +               + + +DL  E +  V V +  M +K +G+    VER+S LLDPRRKT
Sbjct:  188 ALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKT 441          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.100e-55
Identity = 111/233 (47.64%), Postives = 153/233 (65.67%), Query Frame = 0
Query:    2 EALGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFRVHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANM--ESGPFRIRTPDKPQVDPVPYDDAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRKT 232
            +ALGV VV C  HR+NT V+W LGI G  N  R+K MG LM+KLAA V  FSHSAVNN +LK LQ L      +Y+LIRRNDTRWT+Q  MMDRLL LK  + EYFR    + R+L+  EW+ITNEVCS+L  V+EV  ++QGA+DT+ISQA F++ E++  +  +S P R +   +P+       + +  +L    +  ++V +  M +K +G+    VER+S L+DPRRK+
Sbjct:  376 KALGVPVVKCNCHRVNTAVLWALGIAG--NGRRNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPE-------EMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKS 599          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 1.530e-55
Identity = 110/234 (47.01%), Postives = 146/234 (62.39%), Query Frame = 0
Query:    3 ALGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRW-TTQRNMMDRLLLLKAAVVEYFRVHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANMESGPFRIRTPDKPQV----DPVPYDDAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRK 231
            AL V VV C  HR+NT VVW LGI       ++  MG LM+KLAA V  FSHSAVNN ELK LQ L   FS+IYEL+RRNDTRW T+Q  MMDR L LK  + E+F+ +  + R+L+  EW+I NEVCS+L  V+E+  +VQG+ DT+I QA F++ E++  +      IR P+   V    + +P DD   +DL  E    ++V +  M KK +G      ER+S L+DPRRK
Sbjct:   28 ALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRK 259          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 2.610e-54
Identity = 111/237 (46.84%), Postives = 148/237 (62.45%), Query Frame = 0
Query:    3 ALGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFRVHASD-------KRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANMESGPFRIRTPDKPQVDPVPYDDAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRKT 232
            ALGV VV C  HR+N+ V+W LGI G+  TC++KPM    +KLAA V  FSHSAVNN  LK LQ L     +IYE IRRNDTRWT+Q+ MM RLL+LK  + EYFR  A         KR+L+  EW++TNEVCS+L+ V+EV  ++QGA +T++SQATF++ E     ES            +D +  ++ + + L  E +  V V    M +K +G+    VER+S LLDPRRKT
Sbjct:  188 ALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEGEGQNESS-----------LDGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKT 409          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 6.700e-50
Identity = 117/255 (45.88%), Postives = 151/255 (59.22%), Query Frame = 0
Query:    3 ALGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFR------VHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANM--ESGPFR----IRTPDKPQVDPVPYDDAETS--------------DLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRK 231
            ALGV VV C  HR+N+ VVW LGI G+  TCR+  MG LM+KLAA V  FS SAVNN  LK LQ L     +IYEL+RRNDT   +Q  MM RLL LK  + EYFR       +   KR+LS  EW +TNEVCS+L  V+E+  ++QGA+DT+ISQA FL+ E++  +  E+ P R    I TP  P +D +P ++ E                DL  E +    V +  M +K +G+    VER+S LLDPRRK
Sbjct:   43 ALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNNM-LKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRK 293          
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.430e-47
Identity = 90/198 (45.45%), Postives = 127/198 (64.14%), Query Frame = 0
Query:   38 MGVLMRKLAACVDKFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLKAAVVEYFRVHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYISQATFLMTELLANMESGPFRIRTPDKPQV----DPVPYDDAETSDLCGEVRTAVDVCVGYMGKKNLGEVGNPVERISTLLDPRRK 231
            MG LM+KLAA V  F+HSAVNN ELK LQ L   FS+IYEL+RRNDTRWT+Q  MMDR L LK  + EYF+ +  ++R+L+  EW++ NEVCS+L  V+EV  ++QG+ DT+I QA F++ EL+  +      IR P+   V    + +P D  + +DL  E +  ++V +  M +K +G     VE +S L+DP  K
Sbjct:    1 MGTLMKKLAAMVGVFNHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRCLALKKPISEYFKKYLQNERKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDTHIGQAMFIIHELIEMLGEDTHPIRQPNATVVPVPPEGIPTDGTQVTDLTAEAQCVLEVLLDVMREKGVGSAQVAVESLSALMDPSGK 198          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig944.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KAN7_9PHAE2.440e-6352.40Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE4.830e-6152.40Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE1.880e-5848.72Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5JTB8_9PHAE6.930e-5747.44Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZU3_9PHAE4.540e-5645.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRT6_9PHAE1.100e-5547.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAS2_9PHAE1.530e-5547.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQI6_9PHAE2.610e-5446.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDJ6_9PHAE6.700e-5045.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZZ1_9PHAE1.430e-4745.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig944contigA-nodosum_M_contig944:88781..89900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig944.16.1mRNA_A-nodosum_M_contig944.16.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig944 88780..89900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig944.16.1 ID=prot_A-nodosum_M_contig944.16.1|Name=mRNA_A-nodosum_M_contig944.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=232bp
IEALGVIVVLCCAHRLNTVVVWMLGIGGTVNTCRDKPMGVLMRKLAACVD
KFSHSAVNNSELKALQELVPQFSKIYELIRRNDTRWTTQRNMMDRLLLLK
AAVVEYFRVHASDKRRLSVREWSITNEVCSVLDPVAEVNNKVQGAEDTYI
SQATFLMTELLANMESGPFRIRTPDKPQVDPVPYDDAETSDLCGEVRTAV
DVCVGYMGKKNLGEVGNPVERISTLLDPRRKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf