prot_A-nodosum_M_contig944.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig944.11.1
Unique Nameprot_A-nodosum_M_contig944.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length305
Homology
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 3.440e-63
Identity = 116/302 (38.41%), Postives = 175/302 (57.95%), Query Frame = 0
Query:    4 ADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            AD CVFR    G++   L V+VDD+ ++   +E  + F R+L + +++K+LG   +Y GC   RD     LK  Q  YA  +   FG+     +P+  G+K       L   ++ EE+   P+RE +G+LM  +T TRPDI++AVR+VA++C +P   HW+A   IL +V RT + GI +         M VF D  +A+    RRS SGG V+ GGG ISWFS  Q      T+EAEYV++++++KEV   RQ+  F++P      + + EDNQGAI+ A +  S+   +HID++HH IR+
Sbjct:    2 ADTCVFRLIEEGRVVVTLVVHVDDIFSIG-EEERYDQFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGMK-------LSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRE 295          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 6.580e-63
Identity = 118/305 (38.69%), Postives = 177/305 (58.03%), Query Frame = 0
Query:    1 QSRADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            Q  AD CVFR    G++  I+ V+VDD+ A+   KE  + F  +L   + +K+LG   +Y  C   RD  + +L+  Q  +A  +   +GI     VP+   VK       L   +E E    +P+RE VG+LM  +T TRPDI++AVR+VA++C +P M HWKA   IL +VRRT   GI +         M+VFVD  +A+    RRS SGG V+ GGG ++WFS  Q      T+EAEYVA+++++KEV   RQ+  F++P      + + EDNQGAI+  ++  ++  ++HID++HH IR+
Sbjct:   38 QCLADACVFRLMEEGRVIMIIVVHVDDIFAVG-QKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVK-------LTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRE 334          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 8.350e-63
Identity = 118/305 (38.69%), Postives = 177/305 (58.03%), Query Frame = 0
Query:    1 QSRADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            Q  AD CVFR    G++   L V+VDD+ ++   +E  + F R+L + + +K+LG   +Y GC   RD     LK  Q  YA  +   FG+     +P+  G+K       L   ++ EE+   P+RE +G+LM  +T TRPDI++AVR+VA++C +P   HW+A   IL +V RT + GI +         M VFVD  +A+    RRS SGG V+ GGG ISWFS  Q      T+EAEYV++++++KEV   RQ+  F++P      + + EDNQGAI+ A +  S+  ++HID++HH IR+
Sbjct:  100 QCMADTCVFRLIEEGRVVVTLVVHVDDIFSIG-EEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-------LSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRE 396          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 1.180e-62
Identity = 119/305 (39.02%), Postives = 178/305 (58.36%), Query Frame = 0
Query:    1 QSRADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            Q  AD CVFR    G++  I+ V+VDD+ A+   KE  + F  +L   + +K+LG   +Y  C   RD  + +L+  Q  +A  +   +GI     VP+   VK       L   +E E    +P+RE VG+LM  +T TRPDI++AVR+VA++C +P M HWKA   IL +VRRT   GI +         M+VFVD  +A+    RRS SGG V+ GGG ++WFS  Q      T+EAEYVA+++++KEV   RQ+  F++P      + + EDNQGAI+ A++  ++  ++HID++HH IR+
Sbjct:  100 QCLADACVFRLMEEGRVIMIIVVHVDDIFAVG-QKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVK-------LTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRE 396          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 3.580e-61
Identity = 118/305 (38.69%), Postives = 177/305 (58.03%), Query Frame = 0
Query:    1 QSRADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            Q  AD CVFR    G++   L V+VDD+ ++   +E  + F R+L + + +K+LG   +Y GC   RD     LK  Q  YA  +   FG+     +P+  G+K       L   ++ EE+   P+RE +G+LM  +T TRPDI++AVR+VA++C +P   HW+A   IL +V RT + GI +         M VFVD  +A+    RRS SGG V+ GGG ISWFS  Q      T+EAEYV++++++KEV   RQ+  F++P      + + EDNQGAI+ A +  S+  ++HID++HH IR+
Sbjct:  274 QCMADTCVFRLIEEGRVVVTLVVHVDDIFSIG-EEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-------LSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRE 570          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 4.420e-59
Identity = 118/305 (38.69%), Postives = 177/305 (58.03%), Query Frame = 0
Query:    1 QSRADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            Q  AD CVFR    G++   L V+VDD+ ++   +E  + F R+L + + +K+LG   +Y GC   RD     LK  Q  YA  +   FG+     +P+  G+K       L   ++ EE+   P+RE +G+LM  +T TRPDI++AVR+VA++C +P   HW+A   IL +V RT + GI +         M VFVD  +A+    RRS SGG V+ GGG ISWFS  Q      T+EAEYV++++++KEV   RQ+  F++P      + + EDNQGAI+ A +  S+  ++HID++HH IR+
Sbjct:  795 QCMADTCVFRLIEEGRVVVTLVVHVDDIFSIG-EEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-------LSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRE 1091          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 2.470e-58
Identity = 111/286 (38.81%), Postives = 168/286 (58.74%), Query Frame = 0
Query:   20 ILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            I+ V+VDD+ A+   KE  + F  +L   + +K+LG   +Y  C   RD  + +L+  Q  +A  +   +GI     VP+   VK       L   +E E    +P+RE VG+LM  +T TRPDI++AVR+VA++C +P M HWKA   IL +VRRT   GI +         M+VFVD  +A+    RRS SGG V+ GGG ++WFS  Q      T+EAEYVA+++++KEV   RQ+  F++P      + + EDNQGAI+ A++  ++  ++HID++HH IR+
Sbjct:    2 IMVVHVDDIFAVG-QKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVK-------LTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRE 279          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 2.960e-58
Identity = 114/305 (37.38%), Postives = 172/305 (56.39%), Query Frame = 0
Query:    1 QSRADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            Q  AD CVFR    G +  IL V+VDD+ A+   +E  + F  +L  ++ +K+LG   +Y GC   R++    L   Q  +   +   +G+     VP++ GVK       L   +  E  T+ P+RE VG+LM  +T TRPDI++AVR+VA++C +P + HW A   IL + RRT   GI +         ++ + D   A+    RRS SGG V  GGGA+SWFS  Q      T+EAEYVA+ ++VKE+   RQI  F++P +    + + EDNQGAI+ A +  S+  ++HID++HH +R+
Sbjct:  124 QCMADACVFRLIEDGCVVLILVVHVDDIFAVG-ERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-------LSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRE 420          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 5.210e-58
Identity = 115/305 (37.70%), Postives = 167/305 (54.75%), Query Frame = 0
Query:    1 QSRADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            QS +DPCV R     ++  I A++VDD+L    TK   E  V  L  +L  K+LG   +++GC I+RDR    ++  Q  Y R + ERF I  T+ +P        S  +  ++  E EE   +P+RE VG LM  +  TRP+ S+AVR+VA+    P  + WKA  KIL +++ T    + Y  D        V+VD   A+    RRS SG  VL+ G  +SWFS  Q   +  TSEAEY+AM + VKE      +  F+ P+ K   +D+ EDN+GAI  A +  SS R++HID++HH +R+
Sbjct:   46 QSLSDPCVLRFMMGDEVMGIFAIHVDDILY-AGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRN 342          
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 1.630e-57
Identity = 117/302 (38.74%), Postives = 176/302 (58.28%), Query Frame = 0
Query:    4 ADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLKIKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVTEGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRSVAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLGHATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVKEVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKHHLIRD 305
            AD CVFR    G +  I+ V+VDD+ A+   KE  + F  +L   + +K+LG   +Y  C   RD  + +L+  Q  +A  +   +G+     VP+   VK       L   +E E    +P+RE VG+LM  +T TRPDI++AVR+VA++C +P M HWKA   IL +VRRT   GI +         M+VFVD  +A+    RRS SGG V+ GGG ++WFS  Q      T+EAEYVA+++++KEV   RQ+  F++P      + + EDNQGAI+ A++  ++  ++HID++HH IR+
Sbjct: 1137 ADACVFRLMEDGCVIMIIVVHVDDIFAVG-QKERCDKFGSDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVK-------LTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRE 1430          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig944.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR24_9PHAE3.440e-6338.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE6.580e-6338.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE8.350e-6338.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE1.180e-6239.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE3.580e-6138.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE4.420e-5938.69Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KP70_9PHAE2.470e-5838.81Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE2.960e-5837.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRE7_9PHAE5.210e-5837.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JHY5_9PHAE1.630e-5738.74Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 14..94
e-value: 9.0E-9
score: 35.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 2..171
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 194..305
e-value: 2.79211E-27
score: 101.776
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 19..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig944contigA-nodosum_M_contig944:70884..71798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig944.11.1mRNA_A-nodosum_M_contig944.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig944 70884..71798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig944.11.1 ID=prot_A-nodosum_M_contig944.11.1|Name=mRNA_A-nodosum_M_contig944.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=305bp
QSRADPCVFRKFAAGKMEAILAVYVDDLLALTVTKEAMETFVRELRSTLK
IKDLGGTSYYMGCHITRDRAKKVLKFDQHIYARTITERFGIGETAMVPVT
EGVKPLSKEHGLKTTEEKEEMTKIPYREAVGALMCTSTMTRPDISSAVRS
VAKFCENPGMAHWKAVAKILQFVRRTPERGIIYGGDGNGRAVMRVFVDLG
HATCLDTRRSTSGGAVLLGGGAISWFSGAQVTTAEGTSEAEYVAMSEIVK
EVQLSRQIKAFIMPALKSNPVDIVEDNQGAIKTANDRHSSKRARHIDIKH
HLIRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf