prot_A-nodosum_M_contig942.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig942.20.1
Unique Nameprot_A-nodosum_M_contig942.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length548
Homology
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BLAST of mRNA_A-nodosum_M_contig942.20.1 vs. uniprot
Match: A0A6H5JBU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU0_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.760e-42
Identity = 147/418 (35.17%), Postives = 190/418 (45.45%), Query Frame = 0 
Query:   61 RAKDS-LKAAALHCIALDGLGDFPADHKLGLFEVAPADDTRAMTPTEAAAMPRISGAQVEFSV--QRQEVGHLDSPSARGVNVTVLLQLSLKGDRTEQGRRPEFAPPGMQDYEANRMSSRSLEAASDAEAPIGVPDREEMGAAVAVAAVASARDRAEVQAAISVLTCWNILAGAEEAGAY-MVHLEVAAVFGSGGDWYTANQDIALTRNSFQEASHSSSLPSWPWATLASKSINDFNEQEATILVGNLEWLLEEDVRDKLDEIAVADVKVYRRVHAEANGVEPFQAGRSESQLLEQQLLLQATLCKRDSSGVGVDSTSEKASASFRTSLTPYAEQRPQARRGAAPGIGSNDSGVPTAKGVSPNQAGGSVNAPSSQSCVVSEMEDGEWWRELDEHEGGRGMAAVNALPRHPDWKPGQWR 474
            RA +S +KAAA HC+A+D +G FPA+H LGLFE  P    R +  T     PR++ A VEFS   QRQ  G  +S        T++ ++ L+ D T + R       G     + R +               VP  E M    A A  A+A + AE Q AIS L  WN++   E      M+ +EV A FG  GDWYTA++ I LT +      HSS+L S                  AT      +W    DV  KLDE   ADV+VY      +   E  +AG          LLL+ TLCKR S   G  +  E    + + +LTPYAE+ P     A                           +PS  S VVSE+ D EWWR  +E E GRGM AV+ALPR P WKPG W+
Sbjct:   54 RATESDVKAAARHCVAVDEVGRFPANHALGLFETEPG---RLVLGT-----PRVTDASVEFSALPQRQNAGGSNSDETPATG-TIVFKVVLEVDNTGRWRE------GGGGTTSGRRTGEP------------VPTGEGMEMTAAAATAATAENPAEAQMAISALAAWNLMTTRETPAMLPMIRVEVGAAFGYHGDWYTASKTIPLTSDG---TGHSSALLS-----------------SATF-----DWQPAPDVWSKLDEPMAADVRVYGTA---STPTEEQEAGL---------LLLRGTLCKRASGFGGRSTRDETTQGTMKAALTPYAERLPAVAAEAV------------------------AISPSRPSVVVSEIRDEEWWRAREEEESGRGMDAVDALPRLPRWKPGDWK 383
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig942.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBU0_9PHAE1.760e-4235.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig942contigA-nodosum_M_contig942:34065..36022 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig942.20.1mRNA_A-nodosum_M_contig942.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig942 33903..36193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig942.20.1 ID=prot_A-nodosum_M_contig942.20.1|Name=mRNA_A-nodosum_M_contig942.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=548bp
MLGRFRCVSDFSIKSETVWSGLLQNFPDAKGKGKGGAANGRPNHETTLEE
TRPAAAAVVDRAKDSLKAAALHCIALDGLGDFPADHKLGLFEVAPADDTR
AMTPTEAAAMPRISGAQVEFSVQRQEVGHLDSPSARGVNVTVLLQLSLKG
DRTEQGRRPEFAPPGMQDYEANRMSSRSLEAASDAEAPIGVPDREEMGAA
VAVAAVASARDRAEVQAAISVLTCWNILAGAEEAGAYMVHLEVAAVFGSG
GDWYTANQDIALTRNSFQEASHSSSLPSWPWATLASKSINDFNEQEATIL
VGNLEWLLEEDVRDKLDEIAVADVKVYRRVHAEANGVEPFQAGRSESQLL
EQQLLLQATLCKRDSSGVGVDSTSEKASASFRTSLTPYAEQRPQARRGAA
PGIGSNDSGVPTAKGVSPNQAGGSVNAPSSQSCVVSEMEDGEWWRELDEH
EGGRGMAAVNALPRHPDWKPGQWRVFQDRTKKQRRHQRMEESARRRGNNI
NSETRDIIQSRTKEKRRGNLGVVGFARRLWRAAGREWGRFRRLLRPK*
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