prot_A-nodosum_M_contig941.7.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig941.7.2
Unique Nameprot_A-nodosum_M_contig941.7.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length280
Homology
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: D7G096_ECTSI (Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 1.090e-105
Identity = 152/162 (93.83%), Postives = 159/162 (98.15%), Query Frame = 0
Query:    1 MLSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHLDGSPVV 162
            MLSMSPSKRRDTDMMKLMMSDFEV+IPDESSMHDFLVAFPGP DTPY+GG WKVHVTLPKEYPFKSPSIGFENR+FHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDP+AY +RIR+CVRLHASDPVHLDG+PVV
Sbjct:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVV 162          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A835Z4W6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.880e-86
Identity = 122/153 (79.74%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHLD 157
            SP+KRRD DMMKLMMSDF V+IPDE SMHDF+VAFPGP +TPYEGG WKVHV+LP+EYP++SPSIGFENRI+HPNVDEMSGSVCLDVINQTWSPMFDLVNIF +F+PQLL+YPNPTDPLN EAAAL++RDP+AY +RIR+ VRLHAS  +  D
Sbjct:    3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFD 155          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A7S2W0L0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA)

HSP 1 Score: 253 bits (646), Expect = 3.520e-81
Identity = 120/163 (73.62%), Postives = 140/163 (85.89%), Query Frame = 0
Query:    7 SKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHLDGSPVVSTASTPS 169
            SKR   DMMKLMMSD+EV+IP+E S+H+F V F GP +TPYEGG WKVHV LP++YPFKSPSIGF+NRI+HPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+PQLL YPNPTDPLNGEA AL+MRDPEAYASRIRD VR  AS  V L G    ++AS+PS
Sbjct:   20 SKRMHRDMMKLMMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMFNLVNIFEIFLPQLLRYPNPTDPLNGEAGALMMRDPEAYASRIRDYVRSFASSTVELKGPIPAASASSPS 182          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A7S2AI60_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA)

HSP 1 Score: 246 bits (629), Expect = 5.980e-79
Identity = 116/152 (76.32%), Postives = 133/152 (87.50%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHL 156
            +P+KRR  DMMKLMMSD+EV IPDESSMHDF V F GP DTPYEGG WK+HVTLP  YPFKSPSIGF+NR+FHPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+P LL YPNPTDPLNGEAAAL+MRDP+AYA RIR+ VR  A+  + L
Sbjct:    6 TPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFLPHLLRYPNPTDPLNGEAAALMMRDPDAYALRIREHVRQFATARIDL 157          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A7S2BA17_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA)

HSP 1 Score: 246 bits (628), Expect = 8.620e-78
Identity = 116/154 (75.32%), Postives = 133/154 (86.36%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHLDG 158
            +P+KRR  DMMKLMMSD+EV IPDES MHDF V F GP +TPYE G+WK+HVTLP +YPFKSPSIGF+NR+FHPNVD++SGSVCLDVINQTWSPMF+LVNIF+ F+P LL YPNPTDPLNGEAAALLMRDP+AY  RIRD VR +AS  + L G
Sbjct:   65 NPNKRRHQDMMKLMMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEQFLPHLLRYPNPTDPLNGEAAALLMRDPDAYNLRIRDHVRQYASAKIDLVG 218          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A2D4C6N9_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN)

HSP 1 Score: 237 bits (604), Expect = 1.110e-75
Identity = 110/153 (71.90%), Postives = 134/153 (87.58%), Query Frame = 0
Query:    4 MSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHL 156
            MS +KRR+ D+MKLMMS+++V++ DES  +DF V F GP DTPYEGG WK+HV+LPKEYPFKSPSIGF NRI+HPNVD+MSGSVCLDVINQTWSPMFDL+NIF +FIPQLL YPNPTDPLNGEAA+LLM+D EAY +++R+ VR +AS P+ +
Sbjct:    1 MSSNKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFIPQLLRYPNPTDPLNGEAASLLMKDIEAYNAKVREYVRNYASQPIDM 153          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A8K1C4X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL)

HSP 1 Score: 234 bits (598), Expect = 9.310e-75
Identity = 106/152 (69.74%), Postives = 134/152 (88.16%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHL 156
            S +KRR+TD+MKLMMSD+EV + DE+  +DF V F GP +TPYEGG WK+HV+LPKEYPFKSPSIGF NRI+HPNVD+MSGSVCLDVINQTWSPMF+LVN+F++FIPQLL YPNP+DPLNGEAA+LLM+D +AY +++++ VR +AS P+ +
Sbjct:    3 SMNKRRETDVMKLMMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELVNVFEVFIPQLLRYPNPSDPLNGEAASLLMKDADAYNAKVKEYVRNYASQPIDM 154          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A7S3XS74_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK)

HSP 1 Score: 237 bits (604), Expect = 6.420e-74
Identity = 110/150 (73.33%), Postives = 130/150 (86.67%), Query Frame = 0
Query:    2 LSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHAS 151
            LS SPSKRRD D+++LMMSD+EV +PDE  ++DF VAF GP  TPYEGG W VHVTLP EYP+KSPSIGF NR+FHPNVD+MSGSVCLDVINQTWSPMFDL+NIF++F+PQLL  PNPTDPLNGEAAALL+RDPEAY ++++  V  +AS
Sbjct:   80 LSSSPSKRRDNDLVRLMMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMFDLINIFEVFLPQLLQDPNPTDPLNGEAAALLLRDPEAYRAKVQAYVHRYAS 229          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: H3G861_PHYRM (UBC core domain-containing protein n=31 Tax=Peronosporaceae TaxID=4777 RepID=H3G861_PHYRM)

HSP 1 Score: 231 bits (588), Expect = 2.960e-73
Identity = 105/150 (70.00%), Postives = 130/150 (86.67%), Query Frame = 0
Query:    7 SKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHL 156
            +KRR+TD+MKLMMSD+EV++ DE+   D  + F GP DTPYEGG+WK+HVTLPK+YPFKSPSIGF NRI+HPNVDE SGSVCLDVINQTWSPMF+LVNIF +FIPQLL YPNP+DPLNGEAA+LLM+D E+Y  ++++ VR +AS P+ +
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETKTSDLDIKFNGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFMNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEYVRNYASQPIEM 154          
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: M2Y2Q8_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2Q8_GALSU)

HSP 1 Score: 232 bits (591), Expect = 3.100e-73
Identity = 106/146 (72.60%), Postives = 129/146 (88.36%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHA 150
            SPSKRR+TD+MKLMM+++EV + +   + DF V F GPVDTPYEGG WKVHVTLP+ YP+KSPSIGF NRI+HPNVDEMSGSVCLDVINQTWSPMFDLVNIF++F+PQLL+YPNP+DPLNGEAAAL MR+PE Y ++++D V+ +A
Sbjct:    3 SPSKRRETDLMKLMMAEYEVELAENDRVGDFFVKFCGPVDTPYEGGVWKVHVTLPEAYPYKSPSIGFVNRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLTYPNPSDPLNGEAAALEMREPEKYVAKVKDYVQRYA 148          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G096_ECTSI1.090e-10593.83Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectoc... [more]
A0A835Z4W6_9STRA1.880e-8679.74Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S2W0L0_9STRA3.520e-8173.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2AI60_9STRA5.980e-7976.32Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2BA17_9STRA8.620e-7875.32Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2D4C6N9_PYTIN1.110e-7571.90Ubiquitin-conjugating enzyme E2, putative n=1 Tax=... [more]
A0A8K1C4X5_PYTOL9.310e-7569.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3XS74_HETAK6.420e-7473.33Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
H3G861_PHYRM2.960e-7370.00UBC core domain-containing protein n=31 Tax=Perono... [more]
M2Y2Q8_GALSU3.100e-7372.60Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 6..151
e-value: 4.2E-46
score: 169.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..260
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 5..153
NoneNo IPR availablePANTHERPTHR24068:SF329UBIQUITIN-CONJUGATING ENZYME E2 4-RELATEDcoord: 5..153
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 14..145
e-value: 2.6E-37
score: 127.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 5..151
score: 40.332184
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 13..146
e-value: 1.83359E-46
score: 150.816
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 2..159
e-value: 2.0E-48
score: 165.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 8..150
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 76..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig941contigA-nodosum_M_contig941:157936..163276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig941.7.2mRNA_A-nodosum_M_contig941.7.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig941 156020..163276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig941.7.2 ID=prot_A-nodosum_M_contig941.7.2|Name=mRNA_A-nodosum_M_contig941.7.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=280bp
MLSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGG
TWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMF
DLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHA
SDPVHLDGSPVVSTASTPSTSATASGGGSSSISGGSSSGGRSEEEESSSE
EKATAMDTDANANADGANDNAVDGTKDEGKLEGDKRRDSAEGGGNGGNSS
RSSSSSEFMMEMEMDETASGVSALSDVVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS