mRNA_A-nodosum_M_contig941.7.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: D7G096_ECTSI (Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI) HSP 1 Score: 318 bits (814), Expect = 7.770e-98 Identity = 152/162 (93.83%), Postives = 159/162 (98.15%), Query Frame = 1
Query: 1 MLSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHLDGSPVV 486
MLSMSPSKRRDTDMMKLMMSDFEV+IPDESSMHDFLVAFPGP DTPY+GG WKVHVTLPKEYPFKSPSIGFENR+FHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDP+AY +RIR+CVRLHASDPVHLDG+PVV
Sbjct: 1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVV 162
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A835Z4W6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.820e-79 Identity = 122/153 (79.74%), Postives = 140/153 (91.50%), Query Frame = 1
Query: 13 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHLD 471
SP+KRRD DMMKLMMSDF V+IPDE SMHDF+VAFPGP +TPYEGG WKVHV+LP+EYP++SPSIGFENRI+HPNVDEMSGSVCLDVINQTWSPMFDLVNIF +F+PQLL+YPNPTDPLN EAAAL++RDP+AY +RIR+ VRLHAS + D
Sbjct: 3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFD 155
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A7S2W0L0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.820e-74 Identity = 120/163 (73.62%), Postives = 140/163 (85.89%), Query Frame = 1
Query: 19 SKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHLDGSPVVSTASTPS 507
SKR DMMKLMMSD+EV+IP+E S+H+F V F GP +TPYEGG WKVHV LP++YPFKSPSIGF+NRI+HPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+PQLL YPNPTDPLNGEA AL+MRDPEAYASRIRD VR AS V L G ++AS+PS
Sbjct: 20 SKRMHRDMMKLMMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMFNLVNIFEIFLPQLLRYPNPTDPLNGEAGALMMRDPEAYASRIRDYVRSFASSTVELKGPIPAASASSPS 182
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A7S2AI60_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA) HSP 1 Score: 246 bits (629), Expect = 2.210e-72 Identity = 116/152 (76.32%), Postives = 133/152 (87.50%), Query Frame = 1
Query: 13 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHL 468
+P+KRR DMMKLMMSD+EV IPDESSMHDF V F GP DTPYEGG WK+HVTLP YPFKSPSIGF+NR+FHPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+P LL YPNPTDPLNGEAAAL+MRDP+AYA RIR+ VR A+ + L
Sbjct: 6 TPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFLPHLLRYPNPTDPLNGEAAALMMRDPDAYALRIREHVRQFATARIDL 157
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A7S2BA17_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA) HSP 1 Score: 246 bits (628), Expect = 3.130e-71 Identity = 116/154 (75.32%), Postives = 133/154 (86.36%), Query Frame = 1
Query: 13 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHLDG 474
+P+KRR DMMKLMMSD+EV IPDES MHDF V F GP +TPYE G+WK+HVTLP +YPFKSPSIGF+NR+FHPNVD++SGSVCLDVINQTWSPMF+LVNIF+ F+P LL YPNPTDPLNGEAAALLMRDP+AY RIRD VR +AS + L G
Sbjct: 65 NPNKRRHQDMMKLMMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEQFLPHLLRYPNPTDPLNGEAAALLMRDPDAYNLRIRDHVRQYASAKIDLVG 218
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A2D4C6N9_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN) HSP 1 Score: 237 bits (604), Expect = 2.430e-69 Identity = 110/153 (71.90%), Postives = 134/153 (87.58%), Query Frame = 1
Query: 10 MSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHL 468
MS +KRR+ D+MKLMMS+++V++ DES +DF V F GP DTPYEGG WK+HV+LPKEYPFKSPSIGF NRI+HPNVD+MSGSVCLDVINQTWSPMFDL+NIF +FIPQLL YPNPTDPLNGEAA+LLM+D EAY +++R+ VR +AS P+ +
Sbjct: 1 MSSNKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFIPQLLRYPNPTDPLNGEAASLLMKDIEAYNAKVREYVRNYASQPIDM 153
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A8K1C4X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL) HSP 1 Score: 234 bits (598), Expect = 1.790e-68 Identity = 106/152 (69.74%), Postives = 134/152 (88.16%), Query Frame = 1
Query: 13 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHL 468
S +KRR+TD+MKLMMSD+EV + DE+ +DF V F GP +TPYEGG WK+HV+LPKEYPFKSPSIGF NRI+HPNVD+MSGSVCLDVINQTWSPMF+LVN+F++FIPQLL YPNP+DPLNGEAA+LLM+D +AY +++++ VR +AS P+ +
Sbjct: 3 SMNKRRETDVMKLMMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELVNVFEVFIPQLLRYPNPSDPLNGEAASLLMKDADAYNAKVKEYVRNYASQPIDM 154
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: A0A7S3XS74_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK) HSP 1 Score: 237 bits (604), Expect = 1.410e-67 Identity = 110/150 (73.33%), Postives = 130/150 (86.67%), Query Frame = 1
Query: 4 LSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHAS 453
LS SPSKRRD D+++LMMSD+EV +PDE ++DF VAF GP TPYEGG W VHVTLP EYP+KSPSIGF NR+FHPNVD+MSGSVCLDVINQTWSPMFDL+NIF++F+PQLL PNPTDPLNGEAAALL+RDPEAY ++++ V +AS
Sbjct: 80 LSSSPSKRRDNDLVRLMMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMFDLINIFEVFLPQLLQDPNPTDPLNGEAAALLLRDPEAYRAKVQAYVHRYAS 229
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: H3G861_PHYRM (UBC core domain-containing protein n=31 Tax=Peronosporaceae TaxID=4777 RepID=H3G861_PHYRM) HSP 1 Score: 231 bits (588), Expect = 4.540e-67 Identity = 105/150 (70.00%), Postives = 130/150 (86.67%), Query Frame = 1
Query: 19 SKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHASDPVHL 468
+KRR+TD+MKLMMSD+EV++ DE+ D + F GP DTPYEGG+WK+HVTLPK+YPFKSPSIGF NRI+HPNVDE SGSVCLDVINQTWSPMF+LVNIF +FIPQLL YPNP+DPLNGEAA+LLM+D E+Y ++++ VR +AS P+ +
Sbjct: 5 NKRRETDVMKLMMSDYEVHLTDETKTSDLDIKFNGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFMNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEYVRNYASQPIEM 154
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Match: M2Y2Q8_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2Q8_GALSU) HSP 1 Score: 232 bits (591), Expect = 5.100e-67 Identity = 106/146 (72.60%), Postives = 129/146 (88.36%), Query Frame = 1
Query: 13 SPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGTWKVHVTLPKEYPFKSPSIGFENRIFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPEAYASRIRDCVRLHA 450
SPSKRR+TD+MKLMM+++EV + + + DF V F GPVDTPYEGG WKVHVTLP+ YP+KSPSIGF NRI+HPNVDEMSGSVCLDVINQTWSPMFDLVNIF++F+PQLL+YPNP+DPLNGEAAAL MR+PE Y ++++D V+ +A
Sbjct: 3 SPSKRRETDLMKLMMAEYEVELAENDRVGDFFVKFCGPVDTPYEGGVWKVHVTLPEAYPYKSPSIGFVNRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLTYPNPSDPLNGEAAALEMREPEKYVAKVKDYVQRYA 148 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig941.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig941.7.2 >prot_A-nodosum_M_contig941.7.2 ID=prot_A-nodosum_M_contig941.7.2|Name=mRNA_A-nodosum_M_contig941.7.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=280bp MLSMSPSKRRDTDMMKLMMSDFEVYIPDESSMHDFLVAFPGPVDTPYEGGback to top mRNA from alignment at A-nodosum_M_contig941:156020..163276- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig941.7.2 ID=mRNA_A-nodosum_M_contig941.7.2|Name=mRNA_A-nodosum_M_contig941.7.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7257bp|location=Sequence derived from alignment at A-nodosum_M_contig941:156020..163276- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig941:156020..163276- >mRNA_A-nodosum_M_contig941.7.2 ID=mRNA_A-nodosum_M_contig941.7.2|Name=mRNA_A-nodosum_M_contig941.7.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=840bp|location=Sequence derived from alignment at A-nodosum_M_contig941:156020..163276- (Ascophyllum nodosum dioecious)back to top |