prot_A-nodosum_M_contig94.66.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig94.66.1
Unique Nameprot_A-nodosum_M_contig94.66.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length192
Homology
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA)

HSP 1 Score: 296 bits (758), Expect = 3.310e-100
Identity = 148/192 (77.08%), Postives = 167/192 (86.98%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            MGIDL AGGRRVGHK R  P S NVYL LLVKL+RFL+RRTDS F KVVLKRLYMS+TNR PLS+SRL R+M++K+E TAVIVGTVTDD RLLEVPK+SVCAL+FTETARARIL +GGEC+T DQLALR PKGS TVLLRGPK  RE  KHFGHR+T  ++ THD VKPYVRSKGRKFE+ARGRR++NGFK+
Sbjct:    1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA)

HSP 1 Score: 294 bits (752), Expect = 2.720e-99
Identity = 148/192 (77.08%), Postives = 169/192 (88.02%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            MGIDL AGGRRVGHKVR +P+SKNVYL LLV+L+RFL+RRTDS F KVVLKRLYMSKTN  P+S+SRL RYM+ KE+ TAVIVGTVTDD RLL++P L VCALKFTE ARARIL AGGE +T DQLAL+ PKG+ TVLLRGPK+AREAV+HFGHR+T++++HTH  VKPYVRSKGRKFEKARGRR S GFKV
Sbjct:    1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA)

HSP 1 Score: 288 bits (736), Expect = 7.430e-97
Identity = 145/192 (75.52%), Postives = 165/192 (85.94%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            MGIDLVAGGRRVGHK R AP+S NVYLGLL KL++FL+RRT+S F   VLKRLYMSKTNR PL L RL ++M  K+  TAV+V TVTDD RLLEVPK++VCAL+FTE+AR+RI+AAGGEC+T DQLAL+ P GSN VLLRGPK+AREA +HFGHRTTV N HTH+ VKPYVRSKGRKFEKARGRR SNGFKV
Sbjct:    1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN)

HSP 1 Score: 284 bits (726), Expect = 2.480e-95
Identity = 141/192 (73.44%), Postives = 163/192 (84.90%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            MGID+VAGGRRVGHK R   +S+NVYL LLVKL+RFL+RRTDSAF K VLKRL+MS+TNR PLSLS L R+MR K++  AV+VGT+TDD R+L VPK++VCAL+FTETARARI+ AGGEC+T DQLALR PKGSNTVLLRGPK ARE   HFGHR+T  ++ TH  VKPYVR+KGRKFEKARGRR S GFKV
Sbjct:    1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA)

HSP 1 Score: 280 bits (717), Expect = 5.620e-94
Identity = 142/192 (73.96%), Postives = 163/192 (84.90%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            MGIDL +GGRR GHK R AP+S NVYL LLVKL+RFL+RRTDS F  V+LKRL+MSK NR P+++SRLVR+M+ KE  TAVIVGT+TDD R+LEVPKLSV ALK T TARARIL AGGE +T D+LALR PKG+N VLLRGP D REA+ HFGHR+TV N+HTHD+VKPY RSKGRKFEKARGRRRS GFK+
Sbjct:    1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A8D0ZR79_PIG (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8D0ZR79_PIG)

HSP 1 Score: 274 bits (701), Expect = 4.480e-92
Identity = 140/157 (89.17%), Postives = 150/157 (95.54%), Query Frame = 0
Query:   36 FLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            FL+RRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVR   NKE +TAV+VGTVTDD+RLL VPKLSVCAL+FTETARARILAAGGECIT DQLALR PKG+NTVLLRGPK+AREAV+HFGH+TTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFK+
Sbjct:    2 FLTRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVR---NKETSTAVLVGTVTDDVRLLAVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHKTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKI 155          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A7S2BC13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BC13_9STRA)

HSP 1 Score: 273 bits (699), Expect = 4.810e-91
Identity = 144/194 (74.23%), Postives = 161/194 (82.99%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEEN--TAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            MGIDLVAGGRRVGHKVR AP S NVYL LLVKL+ FL+RRT S F K V KRL+MSKTN+ P+S+S++ +YM  +E    TAVIVGTVTDDIRL E+P L VCAL+FTE ARARI+ AGGEC+T DQLAL  PKGSN VLLRG  + REA+KHFGHR TV NLHTHD+VKPYVRSKGRKFEKARGRRRS GFKV
Sbjct:   12 MGIDLVAGGRRVGHKVRTAPVSDNVYLKLLVKLYAFLARRTGSDFCKTVTKRLFMSKTNKPPISVSKIAKYMTPQEGKGKTAVIVGTVTDDIRLSELPALRVCALRFTEGARARIVKAGGECLTFDQLALEAPKGSNCVLLRGSMN-REALKHFGHRCTVKNLHTHDNVKPYVRSKGRKFEKARGRRRSTGFKV 204          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A1Z5KDV2_FISSO (Large subunit ribosomal protein L18e n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDV2_FISSO)

HSP 1 Score: 270 bits (691), Expect = 5.280e-90
Identity = 141/193 (73.06%), Postives = 160/193 (82.90%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVR-KAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            MGIDL AGGRRVGHK   K  ++ N Y  LL+KL++FLSRRTDS F   VLKRL+MSK N+ P+ L+RL R M NK++ TAVIVG VTDD+R+L+ PKLSVCAL FTETAR RI+AAGGECITLDQLALR PKG NTVLLRGPK +R A+ HFGHRTTVNN HTH+ VKPYVRSKGRKFE+ARGRRRS GFKV
Sbjct:    1 MGIDLKAGGRRVGHKSSMKKVKTLNPYNRLLIKLYKFLSRRTDSKFCATVLKRLHMSKVNKPPIGLNRLARCMTNKDDKTAVIVGKVTDDVRMLDCPKLSVCALGFTETARKRIVAAGGECITLDQLALRAPKGKNTVLLRGPK-SRAALAHFGHRTTVNNPHTHNGVKPYVRSKGRKFERARGRRRSRGFKV 192          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A7S2W9J6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9J6_9STRA)

HSP 1 Score: 270 bits (691), Expect = 7.170e-90
Identity = 138/192 (71.88%), Postives = 162/192 (84.38%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            MGIDL AGGR+V HK RKAP+S+NVYL LLVKL+ FLSRRTDS F KVVLKRLYMSK N+ P+S+S++ R+M   E+  AVIVG VTDD+RL E+PKL VCAL+FT  ARARIL AGGEC+T DQLAL  P GS TVLLRG K+ REA+KHFGH+T+V + HTHD+VKPY+R+KGRKFE+ARGRRRSNGFKV
Sbjct:   11 MGIDLKAGGRKVHHKERKAPKSQNVYLKLLVKLYSFLSRRTDSKFCKVVLKRLYMSKLNKPPISVSKIARFMGAHEDKIAVIVGPVTDDVRLTELPKLRVCALRFTAGARARILKAGGECLTFDQLALVAPSGSKTVLLRGSKN-REALKHFGHKTSVASPHTHDNVKPYIRAKGRKFERARGRRRSNGFKV 201          
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Match: A0A5D6XV36_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XV36_9STRA)

HSP 1 Score: 268 bits (684), Expect = 8.620e-89
Identity = 134/191 (70.16%), Postives = 159/191 (83.25%), Query Frame = 0
Query:    2 GIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVLKRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSVCALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVKHFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV 192
            GIDL+AGG+ VG K R AP+S+NVYL LLV+L+RFL+RRT+S F  +VL+RLY S TN+AP+S+ R+ RYM   E   AVIVGTVTDDIRLL VPK+SV AL FTETARARI  AGGEC++ DQLALR PKG+NTVLLRG + ARE  +HFGH++TVN++HTHD VKPYVRSKGRKFE ARGRR+S GFKV
Sbjct:   12 GIDLIAGGKVVGKKNRTAPKSENVYLNLLVRLYRFLARRTNSKFNSIVLRRLYQSNTNQAPMSIGRVARYMTGHEGKLAVIVGTVTDDIRLLNVPKVSVVALAFTETARARITNAGGECLSFDQLALRAPKGANTVLLRGRRTAREVYRHFGHKSTVNSVHTHDHVKPYVRSKGRKFEMARGRRKSRGFKV 202          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig94.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3NFY8_9STRA3.310e-10077.08Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2UVJ6_9STRA2.720e-9977.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZAE3_9STRA7.430e-9775.52Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonem... [more]
F0Y951_AURAN2.480e-9573.44Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A4D9D1Z3_9STRA5.620e-9473.96Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A8D0ZR79_PIG4.480e-9289.17Ribosomal_L18e/L15P domain-containing protein n=3 ... [more]
A0A7S2BC13_9STRA4.810e-9174.23Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1Z5KDV2_FISSO5.280e-9073.06Large subunit ribosomal protein L18e n=1 Tax=Fistu... [more]
A0A7S2W9J6_9STRA7.170e-9071.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5D6XV36_9STRA8.620e-8970.16Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021131Ribosomal protein L18e/L15PPFAMPF17135Ribosomal_L18coord: 2..192
e-value: 6.2E-86
score: 286.6
NoneNo IPR availableGENE3D3.100.10.10coord: 1..192
e-value: 4.5E-86
score: 289.2
IPR000039Ribosomal protein L18ePANTHERPTHR1093460S RIBOSOMAL PROTEIN L18coord: 1..191
IPR021132Ribosomal protein L18/L18-A/B/e, conserved sitePROSITEPS01106RIBOSOMAL_L18Ecoord: 51..68
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 22..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig94contigA-nodosum_M_contig94:620873..628775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig94.66.1mRNA_A-nodosum_M_contig94.66.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig94 620873..628775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig94.66.1 ID=prot_A-nodosum_M_contig94.66.1|Name=mRNA_A-nodosum_M_contig94.66.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=192bp
MGIDLVAGGRRVGHKVRKAPESKNVYLGLLVKLFRFLSRRTDSAFAKVVL
KRLYMSKTNRAPLSLSRLVRYMRNKEENTAVIVGTVTDDIRLLEVPKLSV
CALKFTETARARILAAGGECITLDQLALRCPKGSNTVLLRGPKDAREAVK
HFGHRTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021131Ribosomal_L18e/L15P
IPR000039Ribosomal_L18e
IPR021132Ribosomal_L18/L18-A/B/e_CS
IPR036227L18e/L15P_sf