prot_A-nodosum_M_contig94.65.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig94.65.1
Unique Nameprot_A-nodosum_M_contig94.65.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length107
Homology
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A7V2AJT8_9PROT (Dihydrofolate reductase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2AJT8_9PROT)

HSP 1 Score: 85.5 bits (210), Expect = 9.010e-19
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSPRGAYSATSLRAALDLTRRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFP----ATWRRHFRRQISAE 93
            GRP+ GR+N+V++ +P++   GAY   SL  ALD  R L  G + I GG ++Y +AMPLA R+YLT VK R  GD        A WR+ + RQ+  E
Sbjct:   52 GRPLPGRINIVITRDPTYRAEGAYVVHSLDQALDQARNLGDGEIMIIGGAEIYRQAMPLADRIYLTEVKLRPKGDAYLDGFDRAAWRQIWTRQVPVE 148          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A059X4H4_9BACT (Dihydrofolate reductase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A059X4H4_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 1.050e-16
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSP-RGAYSATSLRAALDLTRRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKF---PATWRRHFRRQISAEDH 95
            GR + GRLNVV+SSNP+F P  G+   +SL+AALDL+       V+I GG+Q++ EAMPLA RLYLT +   V GD  F   P  WR      +S+E H
Sbjct:   52 GRTLPGRLNVVISSNPNFKPFEGSVLVSSLQAALDLSEVKSAEEVFIIGGQQVFTEAMPLADRLYLTKIHTTVDGDKFFEYDPNDWRL-----VSSEFH 145          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A3M1WQH3_9GAMM (Dihydrofolate reductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1WQH3_9GAMM)

HSP 1 Score: 79.7 bits (195), Expect = 1.520e-16
Identity = 45/108 (41.67%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSPRGAYSATSLRAALDLTRRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFPATWRRHFR---RQISAEDHSCCTFLTFST 105
            GRP+ GRLN+V+SS P  +  G     SL AAL+  R+     + I GG ++YE+A+PLA RLYLTL+  R  GD +FP    R ++   R     D      LTF T
Sbjct:   56 GRPLPGRLNIVVSSQPDLAIEGCEVVDSLEAALERARQEDPEEIMIIGGARIYEQALPLADRLYLTLIDSRPEGDARFPEWSSRDWKVVQRDFMLPDADNPWSLTFLT 163          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A238D7Z0_THIDL (Dihydrofolate reductase n=4 Tax=root TaxID=1 RepID=A0A238D7Z0_THIDL)

HSP 1 Score: 79.0 bits (193), Expect = 3.690e-16
Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSPRGAYSATSLRAALDLTRRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFPATWRRHFRRQISAEDH 95
            GRP+ GR N+V+S +P +  RGA SA SL+ AL L   +P   V++ GG Q+Y EA+PLAQ+L+LT +     GD +FPA W R    + S + H
Sbjct:   64 GRPLPGRRNIVISRDPGYVARGAESAGSLQEALALCTDVPE--VFVVGGAQIYAEALPLAQQLWLTEIHAEPQGDARFPA-WNRADFIEASRDPH 155          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A327WSM3_9BACT (Dihydrofolate reductase n=1 Tax=Larkinella arboricola TaxID=643671 RepID=A0A327WSM3_9BACT)

HSP 1 Score: 77.4 bits (189), Expect = 1.250e-15
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSPRGAYSATSLRAALDLTRRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFP----ATWRRHFRRQISAEDHSCCTF 100
            G+P+  RLN+V++ NP + P G  +  SL  AL   R+     +++ GG ++Y +A+P+  RLYLT VK    GD +FP    A W+   R    A+D     F
Sbjct:   52 GKPLPNRLNIVITRNPDYQPDGVVAVDSLEKALSEARKTAVTEIFVIGGAEIYRQALPIVDRLYLTEVKAAFEGDTRFPEFDKAEWQEISRHHHPADDRHAVAF 155          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: UPI001645F710 (dihydrofolate reductase n=1 Tax=Bosea sp. CS1GBMeth4 TaxID=1892849 RepID=UPI001645F710)

HSP 1 Score: 77.4 bits (189), Expect = 1.310e-15
Identity = 47/112 (41.96%), Postives = 62/112 (55.36%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSPRGAYSATSLRAAL----DLTRRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFPATWRRHFRRQ------ISAEDHSCCTFLT 102
            G+P+ GR  VVLS +P F P G + A +L  AL    +L R +    V +AGG ++Y +A+PLA RL LTLV  R  GD  FPA  R  FR          AED   C+F++
Sbjct:   55 GKPLPGRQTVVLSRDPGFRPAGVHVAPTLDQALARAQELGRTMGAHAVIVAGGGEVYAQALPLADRLELTLVHARPEGDALFPAFDRAAFREAGRSEHPAGAEDDHPCSFVS 166          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A2E5A061_9BACT (Dihydrofolate reductase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E5A061_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 2.700e-15
Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSPRGAYSATSLRAALDLTRRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFPATWRRHFRRQISAED 94
            G+ +  R  + LS +P+     A  A SL+ AL + R    G VWI GG+ +YEEAMPLA++LYLTL+     GDV FP  W +HF R++S  +
Sbjct:   51 GKHLKERRVIALSRDPNLCFADARKAGSLKEALQMARA-DDGDVWICGGQTIYEEAMPLAEQLYLTLIDADFEGDVFFPP-WEKHFPRELSRRE 142          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A4R2KRG7_9GAMM (Dihydrofolate reductase n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4R2KRG7_9GAMM)

HSP 1 Score: 76.3 bits (186), Expect = 3.080e-15
Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSPRGAYSATSLRAALDLT----RRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFPATWRRHFRRQISAEDH 95
            GRP+ GR N+V+S NP+F+  G + A  +  A  L     R    G + + GG QLY EA+PL QR+YLT V   VAGD   PA     +R +IS EDH
Sbjct:   48 GRPLPGRDNIVVSRNPAFAAAGVHVAPGIDEAFTLAVASARASGAGELMLLGGAQLYVEALPLIQRIYLTRVHADVAGDAYLPALAAEDWR-EISREDH 145          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A4P6WF51_9GAMM (Dihydrofolate reductase n=1 Tax=Marinobacter sp. JH2 TaxID=2547598 RepID=A0A4P6WF51_9GAMM)

HSP 1 Score: 76.3 bits (186), Expect = 3.670e-15
Identity = 46/105 (43.81%), Postives = 60/105 (57.14%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSF-SPRGAYSATSLRAAL---DLTRRLPGGV-VWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFPAT----WRRHFRRQISAEDHS 96
            GRP+ GR+N+V+S NP + +P G  SATSL AAL   +    L GG  V I GG Q+Y EA+P+  R+Y+T V   V GD  FP      W    R   SA D++
Sbjct:   52 GRPLPGRMNLVISRNPEWKAPAGTVSATSLDAALVKAEAQAELDGGEEVMIIGGGQIYAEALPMVDRIYITQVHAEVDGDAYFPEVNWDEWEEIGREDFSASDNN 156          
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Match: A0A7C3NH78_9CHLR (Dihydrofolate reductase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3NH78_9CHLR)

HSP 1 Score: 76.3 bits (186), Expect = 3.830e-15
Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    1 GRPISGRLNVVLSSNPSFSPRGAYSATSLRAALDLTRRLPGGVVWIAGGRQLYEEAMPLAQRLYLTLVKKRVAGDVKFP----ATWRRHFRRQISA 92
            G+P+ GR+++V+S +P   P GA+ A SL AALD  R+     V+I GG ++Y +AM LAQRLYLT+V+     DV FP    A W    R  I A
Sbjct:   52 GKPLPGRISIVVSRSPKALPPGAFWAPSLPAALDAARQAGESEVFIIGGGEIYAQAMALAQRLYLTIVQATFQCDVWFPHFSEADWVEVHREAIPA 147          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig94.65.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V2AJT8_9PROT9.010e-1944.33Dihydrofolate reductase n=1 Tax=Rhodospirillales b... [more]
A0A059X4H4_9BACT1.050e-1648.48Dihydrofolate reductase n=1 Tax=uncultured bacteri... [more]
A0A3M1WQH3_9GAMM1.520e-1641.67Dihydrofolate reductase n=1 Tax=Gammaproteobacteri... [more]
A0A238D7Z0_THIDL3.690e-1645.26Dihydrofolate reductase n=4 Tax=root TaxID=1 RepID... [more]
A0A327WSM3_9BACT1.250e-1535.58Dihydrofolate reductase n=1 Tax=Larkinella arboric... [more]
UPI001645F7101.310e-1541.96dihydrofolate reductase n=1 Tax=Bosea sp. CS1GBMet... [more]
A0A2E5A061_9BACT2.700e-1543.62Dihydrofolate reductase n=1 Tax=Opitutae bacterium... [more]
A0A4R2KRG7_9GAMM3.080e-1544.44Dihydrofolate reductase n=1 Tax=Chromatocurvus hal... [more]
A0A4P6WF51_9GAMM3.670e-1543.81Dihydrofolate reductase n=1 Tax=Marinobacter sp. J... [more]
A0A7C3NH78_9CHLR3.830e-1544.79Dihydrofolate reductase n=1 Tax=Chloroflexi bacter... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024072Dihydrofolate reductase-like domain superfamilyGENE3D3.40.430.10Dihydrofolate Reductase, subunit Acoord: 1..105
e-value: 1.1E-22
score: 82.6
IPR024072Dihydrofolate reductase-like domain superfamilySUPERFAMILY53597Dihydrofolate reductase-likecoord: 2..90
IPR001796Dihydrofolate reductase domainPFAMPF00186DHFR_1coord: 1..91
e-value: 8.7E-18
score: 64.5
IPR001796Dihydrofolate reductase domainPROSITEPS51330DHFR_2coord: 1..106
score: 21.194256
IPR001796Dihydrofolate reductase domainCDDcd00209DHFRcoord: 1..103
e-value: 2.3511E-25
score: 91.0452
IPR012259Dihydrofolate reductasePANTHERPTHR48069DIHYDROFOLATE REDUCTASEcoord: 2..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig94contigA-nodosum_M_contig94:596154..596474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig94.65.1mRNA_A-nodosum_M_contig94.65.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig94 596154..596474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig94.65.1 ID=prot_A-nodosum_M_contig94.65.1|Name=mRNA_A-nodosum_M_contig94.65.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=107bp
GRPISGRLNVVLSSNPSFSPRGAYSATSLRAALDLTRRLPGGVVWIAGGR
QLYEEAMPLAQRLYLTLVKKRVAGDVKFPATWRRHFRRQISAEDHSCCTF
LTFSTH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024072DHFR-like_dom_sf
IPR001796DHFR_dom
IPR012259DHFR