prot_A-nodosum_M_contig94.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig94.4.1
Unique Nameprot_A-nodosum_M_contig94.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length42
Homology
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BLAST of mRNA_A-nodosum_M_contig94.4.1 vs. uniprot
Match: D7G9G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G0_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 2.790e-6
Identity = 21/29 (72.41%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:    1 MGQEGGNFLAVGTNHSDIQLWDASRLKQV 29
            MG++GG+FL VGTNHS +QLWDAS+L+QV
Sbjct:  317 MGRDGGDFLGVGTNHSAVQLWDASKLRQV 345
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BLAST of mRNA_A-nodosum_M_contig94.4.1 vs. uniprot
Match: A0A6H5KEB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB3_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 2.790e-6
Identity = 21/29 (72.41%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:    1 MGQEGGNFLAVGTNHSDIQLWDASRLKQV 29
            MG++GG+FL VGTNHS +QLWDAS+L+QV
Sbjct:  173 MGRDGGDFLGVGTNHSAVQLWDASKLRQV 201
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig94.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9G0_ECTSI2.790e-672.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEB3_9PHAE2.790e-672.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig94contigA-nodosum_M_contig94:23449..23574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig94.4.1mRNA_A-nodosum_M_contig94.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig94 23309..23574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig94.4.1 ID=prot_A-nodosum_M_contig94.4.1|Name=mRNA_A-nodosum_M_contig94.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=42bp
MGQEGGNFLAVGTNHSDIQLWDASRLKQVGRALMRRLISII*
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