prot_A-nodosum_M_contig938.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig938.9.1
Unique Nameprot_A-nodosum_M_contig938.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length113
Homology
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BLAST of mRNA_A-nodosum_M_contig938.9.1 vs. uniprot
Match: D7G729_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G729_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 5.580e-13
Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 0 
Query:    1 MSSMLLAKENASIVP-----PEQQESLVSVLSVASSALLLLIVMGAVYLTYSDWQNKRDMEKAEKFIASTGELPELATQNPKQSPNXXXXXXXXXEEAGGNRQFRRMAKKERKKS 110
            MS MLLA++ A   P     PEQQES++      SS LLL+I+ GAVYL+  +W+NK+++++ +K+  S G+LP      P  +P          E   GNR  RRMAKKE++KS
Sbjct:   65 MSLMLLAEDAAKAAPDMPISPEQQESIIXXXXXMSSVLLLIIISGAVYLSLEEWKNKKELKETDKYT-SAGQLP------PDIAPEALPPGDGEEE---GNRLQRRMAKKEKRKS 169
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig938.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G729_ECTSI5.580e-1341.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig938contigA-nodosum_M_contig938:75680..77236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig938.9.1mRNA_A-nodosum_M_contig938.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig938 75345..77340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig938.9.1 ID=prot_A-nodosum_M_contig938.9.1|Name=mRNA_A-nodosum_M_contig938.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=113bp
MSSMLLAKENASIVPPEQQESLVSVLSVASSALLLLIVMGAVYLTYSDWQ
NKRDMEKAEKFIASTGELPELATQNPKQSPNPNPAEGEGEEEAGGNRQFR
RMAKKERKKSKS*
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