prot_A-nodosum_M_contig938.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig938.3.1
Unique Nameprot_A-nodosum_M_contig938.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length74
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: D7G718_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G718_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.530e-36
Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 0 
Query:    1 MKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 73
            +KYDPTGLR+TM+ +N+ W +SLKEYMP HNVKPWWWH+DVD VA+A+ KGLPPPPG+RM WEAP  + VASW
Sbjct:  136 LKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKSSKVASW 208
[Close]
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: A0A2R5G086_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G086_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.330e-10
Identity = 26/65 (40.00%), Postives = 41/65 (63.08%), Query Frame = 0 
Query:    1 MKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEKGLPPPPGKRMQWEAP 65
            ++YDP+G R+ M ++ +  +  LKE +P H    W    ++D+VA+A+ KG+PPPPGK   W  P
Sbjct:  139 LRYDPSGTRSAMASTWEGLDSKLKENLPIHLPMAWSEWENIDVVAEAKAKGIPPPPGKPAPWTGP 203
[Close]
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Match: A0A835YW15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW15_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 6.510e-8
Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 0 
Query:    1 MKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEKGLPPPPGKRMQWEAPPGANVASW 73
            ++YDPTGLR+TM+ +  E +KSL+ + P+H  +  W      ++ +AEE GLPPP G+ ++         A W
Sbjct:  136 LRYDPTGLRSTMSATWAETDKSLELHRPHHLPRAEWVEDYDKMLKKAEENGLPPPIGRPLRMRYQRIIRTAHW 208
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig938.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G718_ECTSI1.530e-3671.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2R5G086_9STRA2.330e-1040.00Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A835YW15_9STRA6.510e-836.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig938contigA-nodosum_M_contig938:7217..7814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig938.3.1mRNA_A-nodosum_M_contig938.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig938 4657..8581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig938.3.1 ID=prot_A-nodosum_M_contig938.3.1|Name=mRNA_A-nodosum_M_contig938.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=74bp
MKYDPTGLRTTMTTSNKEWEKSLKEYMPNHNVKPWWWHADVDIVAQAEEK
GLPPPPGKRMQWEAPPGANVASW*
back to top