prot_A-nodosum_M_contig938.23.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig938.23.3
Unique Name	prot_A-nodosum_M_contig938.23.3
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	325

Homology

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: A0A6H5JWL4_9PHAE (ACB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWL4_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 1.780e-92
Identity = 138/190 (72.63%), Postives = 164/190 (86.32%), Query Frame = 0

Query:   55 KDTERLFGMAANYMITVKGLALSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            +DTERLFGMAAN+MITVKG+ALSS+QRL+LYSLFKQATEGDC DPKPGLID+VGRAKW AWN LRGMEP+ AM++YL+KV +LCP+WL E Q + P ++  +TQE++ KDL+WEGSD EE ENGAGL  GVT STMA GQ NT EWGA+EEIFAAASEG+V R+  LVS G ++DA+D+EGRTPLHFAAD
Sbjct:   12 EDTERLFGMAANHMITVKGVALSSDQRLELYSLFKQATEGDCEDPKPGLIDLVGRAKWGAWNRLRGMEPVEAMKSYLLKVTELCPDWLAEAQGQPPGNAGMVTQEDMKKDLQWEGSDKEEDENGAGLGFGVTVSTMATGQGNTAEWGANEEIFAAASEGDVVRIRDLVSSGVKVDAQDEEGRTPLHFAAD 201

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: A0A7S4V181_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4V181_GUITH)

HSP 1 Score: 119 bits (298), Expect = 3.040e-28
Identity = 70/184 (38.04%), Postives = 105/184 (57.07%), Query Frame = 0

Query:   61 FGMAANYMITVKGLALSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            F  AANY I     +LSS Q+L+LY+L+KQAT G C+ PKPG +D VG+AKWSAW  L GM    A E Y+ +V  +CP W   T    P         ++++++E+     ++    A ++LG + STM + Q   E+     ++F     G  + L  L+  G+R++ KD++G+T LHFAAD
Sbjct:    4 FKNAANY-IRNPPTSLSSEQQLRLYALYKQATVGKCDAPKPGFLDFVGKAKWSAWKELEGMTQEEAEEEYVKEVDSICPQWRGNTGQVEPN-------RDVHEEIEFLLERKDDNRTNATMKLGPSVSTMRS-QCEDEDVANDLDVFDLYGRGRKDELTLLLKDGSRVNQKDEDGQTLLHFAAD 178

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: A0A3Q7FMV6_SOLLC (ACB domain-containing protein n=6 Tax=Solanum TaxID=4107 RepID=A0A3Q7FMV6_SOLLC)

HSP 1 Score: 102 bits (253), Expect = 4.490e-21
Identity = 65/169 (38.46%), Postives = 87/169 (51.48%), Query Frame = 0

Query:   76 LSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            +S+  +LQLY L+K ATEG C  P+P  + +  RAKW AW  L  M P  AME YL  V +L P+WL+   S N  +S+               +DT       G  +G  FST  + +D+  E    +EI A A EG+ E L   +  G  +D KD EGR PLH+A D
Sbjct:  117 VSNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYLDIVTELFPSWLDG--SANGEESSGA-----------HNADTR------GRPMGPVFSTFISEEDSENELKL-DEIHAFAREGDDENLLKCIESGVPVDVKDSEGRAPLHWAVD 265

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: A0A022QDA1_ERYGU (ACB domain-containing protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QDA1_ERYGU)

HSP 1 Score: 102 bits (253), Expect = 4.550e-21
Identity = 64/174 (36.78%), Postives = 88/174 (50.57%), Query Frame = 0

Query:   73 GLALSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEE--TQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            GL +SS+ +LQLY L+K ATEG C  P+P  + +  RAKW AW  L  M P  AME Y+  V +L P WL+   TQ R    S++                      G+   +G  FST    ++   E    ++I + A EG+ E+L   +  G  I+ KD EGRTPLH+A D
Sbjct:  118 GLKVSSDVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDIVSELYPTWLDGAVTQKRKDARSSDA---------------------GSKAPMGPVFSTFIYEEEPGSEMKL-DDIHSFAQEGDEEKLLKCIESGVPINLKDSEGRTPLHWAVD 269

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: Q4L0H4_AGAAM (Membrane acyl-CoA binding protein n=1 Tax=Agave americana TaxID=39510 RepID=Q4L0H4_AGAAM)

HSP 1 Score: 102 bits (253), Expect = 5.290e-21
Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = 0

Query:   76 LSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            +S+  +LQLY L+K ATEG C  P+P  + +  RAKW+AW  L  M P  AME Y+  V +L P+W +   S+N  + T               SD+ +A  G    +G  FS+ A  +++  +    + I A A EG  + L   +  G  ++++D EGRTPLH+A D
Sbjct:  119 VSNELQLQLYGLYKIATEGPCTKPQPSALKVTARAKWNAWQKLGAMPPEEAMEKYITIVSELYPSWADGAASKNKDEGT---------------SDSSKAAKGP---MGPVFSSFAHEEESDNDLKL-DAIHACAREGEADNLLRHIENGVPVNSRDSEGRTPLHWAVD 268

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: UPI000CED7428 (acyl-CoA-binding domain-containing protein 2 n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED7428)

HSP 1 Score: 100 bits (248), Expect = 1.140e-20
Identity = 58/169 (34.32%), Postives = 86/169 (50.89%), Query Frame = 0

Query:   76 LSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            +SS+ +LQLY L+K ATEG C+ P+P  + +  RAKW AW  L  M P  AM+ Y+  V +L P WL                      ++    D++ A  G+   +G  FST    +++  ++   + I A A EG V+ L   +  G  ++ KD EGRTPLH+A D
Sbjct:  138 VSSDVQLQLYGLYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWL------------------AGSSVKSRDGDSDAASTGSKGPMGPVFSTFVYEEESGNDF-KMDAIHAFAREGEVDNLLKCIESGVTVNLKDSEGRTPLHWAVD 287

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: A0A058ZYY6_EUCGR (ACB domain-containing protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A058ZYY6_EUCGR)

HSP 1 Score: 100 bits (250), Expect = 1.700e-20
Identity = 60/169 (35.50%), Postives = 83/169 (49.11%), Query Frame = 0

Query:   76 LSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            +SS+ +LQLY L+K ATEG C  P+P  + +  RAKW AWN L  M P  AM+ Y+  V +L P W+                      ++ +GS  +     A   +G  FST    +  TE     + I A A EG ++ L   V  G  ++ KD EGRTPLH+A D
Sbjct:  145 VSSDAQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWNKLGAMPPEEAMQKYIDIVTELYPTWI------------------AGSSMKSKGSHGDAPSTEAKGPMGPVFSTFVHEEPGTE--SKLDAIHAFAREGEIDNLLKCVEAGVSVNVKDSEGRTPLHWAVD 293

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: UPI001CB9B9A7 (acyl-CoA-binding domain-containing protein 1-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9B9A7)

HSP 1 Score: 100 bits (249), Expect = 2.260e-20
Identity = 64/190 (33.68%), Postives = 92/190 (48.42%), Query Frame = 0

Query:   56 DTERLFGMAANYMITVKGLALSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLE-ETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            + +  FG A  ++  VK    S   +L+LY L+K AT+G C  P+P  I I  RAKW+AWN L  M P  AM+ YL  + +L P W +  T  +   DS E + ++                      +G  FS+    +++  E    + I   A EG++E L   V  G  +D KD EGRTPLH+A D
Sbjct:  129 ELDEAFGAATAFVAAVK--VFSGEVKLRLYGLYKIATQGPCTVPQPSAIKITSRAKWNAWNKLGAMPPEEAMQKYLEIITELYPTWADGSTCKQRDGDSNESSSKDARP-------------------MGPVFSSFIHEEESGNELKL-DAIHDFAREGDMENLLKCVETGVSVDGKDSEGRTPLHWAVD 296

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: A0A8B8JIJ5_ABRPR (acyl-CoA-binding domain-containing protein 1 isoform X2 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JIJ5_ABRPR)

HSP 1 Score: 100 bits (248), Expect = 2.580e-20
Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = 0

Query:   76 LSSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGAS---EEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            +SS+ +LQLY L+K ATEG C+ P+P  + +  RAKW AW  L  M P +AM+ Y+  V +L P WL+ +       S  M  ++ NK  E  G  +E     A   +G  FST        EE+G+    E I   A EG++  L   +  G  ++ KD EGRTPLH+A D
Sbjct:  121 VSSDVQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGS-------SLVMFLQQRNKSGEGGGPSSE-----ARGAMGPVFSTFV----YEEEYGSDSQMEAIHGFAREGDMANLLKCIENGVSVNLKDSEGRTPLHWAVD 276

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BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Match: A0A2P5DFI2_PARAD (Notch n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5DFI2_PARAD)

HSP 1 Score: 100 bits (248), Expect = 2.850e-20
Identity = 62/193 (32.12%), Postives = 97/193 (50.26%), Query Frame = 0

Query:   56 DTERLFGMAANYMITVKGLAL----SSNQRLQLYSLFKQATEGDCNDPKPGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNPTDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEWGASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAAD 244
            + + +F  A  ++ T     L    SS+ +LQLY L+K ATEG C+ P+P  + +  RAKW AW  L  M P  AM+ Y+  V +L P+WL                     +++  G D++   +G+   +G  FST A  +++  ++   + I   A EG V+ L   +  G  ++ KD EGRTPLH+A D
Sbjct:  113 ELDEVFSAATAFVATAAADRLAQKVSSDVQLQLYGLYKIATEGPCSAPQPLAVKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPSWL------------------AGLNVKSRGGDSDAPSSGSRGPMGPVFSTFAHEEESANDF-KMDAIHNFAREGEVDNLLKCIESGVPVNLKDSEGRTPLHWAVD 286

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig938.23.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JWL4_9PHAE	1.780e-92	72.63	ACB domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A7S4V181_GUITH	3.040e-28	38.04	Hypothetical protein n=2 Tax=Guillardia theta TaxI...	[more]
A0A3Q7FMV6_SOLLC	4.490e-21	38.46	ACB domain-containing protein n=6 Tax=Solanum TaxI...	[more]
A0A022QDA1_ERYGU	4.550e-21	36.78	ACB domain-containing protein n=2 Tax=Erythranthe ...	[more]
Q4L0H4_AGAAM	5.290e-21	34.91	Membrane acyl-CoA binding protein n=1 Tax=Agave am...	[more]
UPI000CED7428	1.140e-20	34.32	acyl-CoA-binding domain-containing protein 2 n=1 T...	[more]
A0A058ZYY6_EUCGR	1.700e-20	35.50	ACB domain-containing protein n=2 Tax=Eucalyptus g...	[more]
UPI001CB9B9A7	2.260e-20	33.68	acyl-CoA-binding domain-containing protein 1-like ...	[more]
A0A8B8JIJ5_ABRPR	2.580e-20	37.79	acyl-CoA-binding domain-containing protein 1 isofo...	[more]
A0A2P5DFI2_PARAD	2.850e-20	32.12	Notch n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 76..94 score: 49.12 coord: 99..114 score: 49.11 coord: 120..137 score: 34.66
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 59..131 e-value: 6.6E-21 score: 74.5
IPR000582	Acyl-CoA-binding protein, ACBP	PROSITE	PS51228	ACB_2	coord: 57..143 score: 34.089149
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 283..297 score: 32.03 coord: 235..250 score: 43.69
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 234..265 e-value: 0.22 score: 20.6 coord: 201..230 e-value: 1700.0 score: 3.3 coord: 267..296 e-value: 0.0015 score: 27.8
IPR002110	Ankyrin repeat	PFAM	PF12796	Ank_2	coord: 208..298 e-value: 5.5E-12 score: 46.1
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 234..266 score: 12.92981
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 267..299 score: 12.04838
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 194..271 e-value: 1.5E-19 score: 71.9
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 272..318 e-value: 2.2E-10 score: 42.5
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 205..312
IPR014352	FERM/acyl-CoA-binding protein superfamily	GENE3D	1.20.80.10		coord: 51..157 e-value: 6.4E-29 score: 101.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..35
None	No IPR available	PANTHER	PTHR24119:SF0	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6	coord: 44..312
None	No IPR available	PANTHER	PTHR24119	ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6	coord: 44..312
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 234..265 score: 11.718143
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 267..299 score: 10.68342
IPR035984	Acyl-CoA binding protein superfamily	SUPERFAMILY	47027	Acyl-CoA binding protein	coord: 57..142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig938	contig	A-nodosum_M_contig938:246036..255130 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig938.23.3	mRNA_A-nodosum_M_contig938.23.3	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig938 245183..255146 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig938.23.3 ID=prot_A-nodosum_M_contig938.23.3|Name=mRNA_A-nodosum_M_contig938.23.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=325bp
MTRVLGPSRAGSPSFSLSRPTVRRQSNVRATHNTTVTTHASPREDIINNV
LSSKKDTERLFGMAANYMITVKGLALSSNQRLQLYSLFKQATEGDCNDPK
PGLIDIVGRAKWSAWNGLRGMEPLNAMEAYLVKVVDLCPNWLEETQSRNP
TDSTEMTQEEINKDLEWEGSDTEEAENGAGLELGVTFSTMAAGQDNTEEW
GASEEIFAAASEGNVERLETLVSGGARIDAKDDEGRTPLHFAADRGQAAV
IFSLLALGAAVDPRDAEGMTPLAYAVACGHEKETDMLVRAGADINCADND
GCSPLSLAEDNLKHVLLRPASTRA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000582	Acyl-CoA-binding_protein
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR014352	FERM/acyl-CoA-bd_prot_sf
IPR035984	Acyl-CoA-binding_sf