prot_A-nodosum_M_contig936.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig936.9.1
Unique Nameprot_A-nodosum_M_contig936.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length124
Homology
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BLAST of mRNA_A-nodosum_M_contig936.9.1 vs. uniprot
Match: D8LDU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU5_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 1.310e-25
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 0 
Query:    1 MKLFRLLAILLSGSLALAY--ADDCSMDSLSQETVDELEMYDKEVYNEPACLE-APPLPIQCNFMGISQDCSACFMTCDGANKFLADTLLDIEEWGALTSNFPEIYINFCPDGEVDSMDEC 118
            MK+F   A ++   L+ A   A++C + SLS    ++L MYDK++Y EP C+  A P+P+ CN+MG+ Q+C  CFMTCDGA ++L D   +I  WG       +  ++FCPD EV+ ++EC
Sbjct:    1 MKIFSHPAAIIFAVLSFARVKAEECIVSSLSDAAQEQLSMYDKDLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMTCDGATRYLDDFAEEISVWGV------DAIVHFCPDAEVELLEEC 115
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig936.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDU5_ECTSI1.310e-2541.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig936contigA-nodosum_M_contig936:273848..290645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig936.9.1mRNA_A-nodosum_M_contig936.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig936 273227..290700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig936.9.1 ID=prot_A-nodosum_M_contig936.9.1|Name=mRNA_A-nodosum_M_contig936.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=124bp
MKLFRLLAILLSGSLALAYADDCSMDSLSQETVDELEMYDKEVYNEPACL
EAPPLPIQCNFMGISQDCSACFMTCDGANKFLADTLLDIEEWGALTSNFP
EIYINFCPDGEVDSMDECPTIAV*
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