prot_A-nodosum_M_contig932.22.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig932.22.1
Unique Nameprot_A-nodosum_M_contig932.22.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length90
Homology
BLAST of mRNA_A-nodosum_M_contig932.22.1 vs. uniprot
Match: A0A6H5L144_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L144_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.970e-10
Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 0
Query:    1 MRTRRLLWSGALLRIGDYRLPKRVMSGELENPGKRGPGGEEKEWTDCVAEDLRRLFGIT-----GDWNTAALDPGAWYSTVREGGCRFMAAWVK 89
            +R RRL ++G ++R+GD RLPKR++ G +   G    GG+E +W   + EDL   FG+      G W  +A D  AWY  + +G   FM  W +
Sbjct:  791 VRKRRLCFAGFVMRMGDNRLPKRMLLGAMAG-GTGYRGGQESDWVYRLGEDLV-AFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHR 882          
BLAST of mRNA_A-nodosum_M_contig932.22.1 vs. uniprot
Match: A0A5J4N6R7_9TREM (Uncharacterized protein n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4N6R7_9TREM)

HSP 1 Score: 58.2 bits (139), Expect = 1.830e-8
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    6 LLWSGALLRIGDYRLPKRVMSGELENPGKRGPGGEEKEWTDCVAEDLRRLFGITGDWNTAALDPGAWYSTVREG 79
            L W G + R+GD R+PK++M G++++ G+R PGG+++ + D V   L R       W   AL+  AW +TVR G
Sbjct:   18 LRWLGHVRRLGDDRIPKQLMYGQVKS-GRRNPGGQKRRYQDVVQVSLSRHNIEFRCWEDLALNRTAWRNTVRAG 90          
BLAST of mRNA_A-nodosum_M_contig932.22.1 vs. uniprot
Match: A0A5J4NEW0_9TREM (C2H2-type domain-containing protein n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NEW0_9TREM)

HSP 1 Score: 58.5 bits (140), Expect = 5.390e-8
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    6 LLWSGALLRIGDYRLPKRVMSGELENPGKRGPGGEEKEWTDCVAEDLRRLFGITGDWNTAALDPGAWYSTVREG 79
            L W G + R+GD R+PK+++ G++++ GKR PGG+++ + D V   L R       W   AL+  AW +TVR G
Sbjct:  678 LRWLGHVRRMGDDRIPKQLLYGQVKS-GKRNPGGQKRRYQDVVQVSLSRCNIDFRCWEDLALNRTAWRNTVRAG 750          
BLAST of mRNA_A-nodosum_M_contig932.22.1 vs. uniprot
Match: A0A5J4N4M3_9TREM (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4N4M3_9TREM)

HSP 1 Score: 58.5 bits (140), Expect = 5.470e-8
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    6 LLWSGALLRIGDYRLPKRVMSGELENPGKRGPGGEEKEWTDCVAEDLRRLFGITGDWNTAALDPGAWYSTVREG 79
            L W G + R+GD R+PK+++ G++++ GKR PGG+++ + D V   L R       W   AL+  AW +TVR G
Sbjct: 1059 LRWLGHVRRMGDDRIPKQLLYGQVKS-GKRNPGGQKRRYQDVVQVSLSRCNIDFRCWEDLALNRTAWRNTVRAG 1131          
BLAST of mRNA_A-nodosum_M_contig932.22.1 vs. uniprot
Match: A0A5J4NBJ4_9TREM (Uncharacterized protein n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NBJ4_9TREM)

HSP 1 Score: 58.5 bits (140), Expect = 5.480e-8
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    6 LLWSGALLRIGDYRLPKRVMSGELENPGKRGPGGEEKEWTDCVAEDLRRLFGITGDWNTAALDPGAWYSTVREG 79
            L W G + R+GD R+PK+++ G++++ GKR PGG+++ + D V   L R       W   AL+  AW +TVR G
Sbjct: 1102 LRWLGHVRRMGDDRIPKQLLYGQVKS-GKRNPGGQKRRYQDVVQVSLSRCNIDFRCWEDLALNRTAWRNTVRAG 1174          
BLAST of mRNA_A-nodosum_M_contig932.22.1 vs. uniprot
Match: UPI000F66AD9C (uncharacterized protein LOC113809286 n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F66AD9C)

HSP 1 Score: 50.1 bits (118), Expect = 2.120e-5
Identity = 23/61 (37.70%), Postives = 37/61 (60.66%), Query Frame = 0
Query:    6 LLWSGALLRIGDYRLPKRVMSGELENPGKRGPGGEEKEWTDCVAEDLRRLFGITGDWNTAA 66
            L W+G ++R+ D+RLPKR++SGEL+  GKR  GG+++ + D +   L+        W   A
Sbjct:  110 LRWAGHVVRMPDHRLPKRLLSGELQQ-GKRSNGGQKRRFKDTLIASLKAFDINHNTWEQTA 169          
BLAST of mRNA_A-nodosum_M_contig932.22.1 vs. uniprot
Match: A0A0L8G1T5_OCTBM (Uncharacterized protein n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8G1T5_OCTBM)

HSP 1 Score: 48.5 bits (114), Expect = 2.650e-5
Identity = 26/79 (32.91%), Postives = 40/79 (50.63%), Query Frame = 0
Query:    1 MRTRRLLWSGALLRIGDYRLPKRVMSGELENPGKRGPGGEEKEWTDCVAEDLRRLFGITGDWNTAALDPGAWYSTVREG 79
            MRT+ L W+G +  + +YR+P +V+ GEL+  GK   GG+   + D +   L+        W   ALD   W + V  G
Sbjct:   21 MRTQ-LHWAGHVAHMPNYRIPMKVLFGELQQ-GKHSHGGQRNGFKDSLKVSLKAFNIDQSSWEQTALDRTKWRAAVHNG 97          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig932.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L144_9PHAE1.970e-1037.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5J4N6R7_9TREM1.830e-839.19Uncharacterized protein n=1 Tax=Paragonimus wester... [more]
A0A5J4NEW0_9TREM5.390e-839.19C2H2-type domain-containing protein n=1 Tax=Parago... [more]
A0A5J4N4M3_9TREM5.470e-839.19Reverse transcriptase domain-containing protein (F... [more]
A0A5J4NBJ4_9TREM5.480e-839.19Uncharacterized protein n=1 Tax=Paragonimus wester... [more]
UPI000F66AD9C2.120e-537.70uncharacterized protein LOC113809286 n=1 Tax=Penae... [more]
A0A0L8G1T5_OCTBM2.650e-532.91Uncharacterized protein n=1 Tax=Octopus bimaculoid... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig932contigA-nodosum_M_contig932:206880..207149 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig932.22.1mRNA_A-nodosum_M_contig932.22.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig932 206880..207161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig932.22.1 ID=prot_A-nodosum_M_contig932.22.1|Name=mRNA_A-nodosum_M_contig932.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=90bp
MRTRRLLWSGALLRIGDYRLPKRVMSGELENPGKRGPGGEEKEWTDCVAE
DLRRLFGITGDWNTAALDPGAWYSTVREGGCRFMAAWVK*
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