prot_A-nodosum_M_contig932.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig932.10.1
Unique Nameprot_A-nodosum_M_contig932.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length397
Homology
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BLAST of mRNA_A-nodosum_M_contig932.10.1 vs. uniprot
Match: A0A6H5K7H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7H2_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 4.710e-23
Identity = 77/139 (55.40%), Postives = 86/139 (61.87%), Query Frame = 0 
Query:  244 GSGGGSAAMRDLDGCWVWYTD--DSAAEADIESMASVA-SVDSREDDLEAAASTDSEVASTASSTGGASSIASGDSSRGRLGGRDLFLSSCSKGSMKAKYTWNDEGEEDLLLGLSLARARMTAGKAACSCKETSCFCRF 379
            G G G A +RDLDGC VWYT+  DSAAEADIES+AS A S                            SS+ SGDSSR R+  RDL L  CS        TW++EGEED+LLGLSLARARMTAGKAACSC+ETSCF RF
Sbjct:  135 GGGSGWAGLRDLDGCVVWYTESVDSAAEADIESLASRAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVCSGDSSRNRVRDRDLSLELCS--------TWSEEGEEDVLLGLSLARARMTAGKAACSCRETSCFXRF 265
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig932.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7H2_9PHAE4.710e-2355.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig932contigA-nodosum_M_contig932:100548..123915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig932.10.1mRNA_A-nodosum_M_contig932.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig932 100548..123916 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig932.10.1 ID=prot_A-nodosum_M_contig932.10.1|Name=mRNA_A-nodosum_M_contig932.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=397bp
NALRLSPQTIIAPPQRHVAVELQVRLEHQLANRSLPRAGRSVLLKLQLDP
GHAVSTHPSRLETSRGMRNAPENRRSRSPKPKQSRSTVDIDSTGGADPPY
PNKKYAAAGDDFDTALSTSVQTAQRQDEIILAPAACPHQATTEEEFAPAT
TAAGSTAIAVTAASTEPSGRKWITEPDGPNSEQGISLQQQLSLARDSGSR
NRGGRNGSPSPSLQRTMPPLPLRSPLLPPPPPPQQPPNMTGPTGSGGGSA
AMRDLDGCWVWYTDDSAAEADIESMASVASVDSREDDLEAAASTDSEVAS
TASSTGGASSIASGDSSRGRLGGRDLFLSSCSKGSMKAKYTWNDEGEEDL
LLGLSLARARMTAGKAACSCKETSCFCRFIGCLAAPSQRSPAAAQHP
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