prot_A-nodosum_M_contig9317.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9317.4.1
Unique Nameprot_A-nodosum_M_contig9317.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length53
Homology
BLAST of mRNA_A-nodosum_M_contig9317.4.1 vs. uniprot
Match: A0A2K3DNP9_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DNP9_CHLRE)

HSP 1 Score: 49.7 bits (117), Expect = 1.590e-5
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    3 ELLERFNLVVSVYGHLLDSKTKKPVLRREVLDAVERLRVHIKTGCISD 50
            ELLERF  VV+ Y   +D  T   +L  + LDA+ER+R+HIK G +SD
Sbjct:  413 ELLERFEKVVAQYERQIDMSTGARLLNTDTLDAIERVRLHIKEGRLSD 460          
BLAST of mRNA_A-nodosum_M_contig9317.4.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 4.080e-5
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    4 LLERFNLVVSVYGHLLDSKTKKPVLRREVLDAVERLRVHIKTGCISD 50
            LLERFNLV+  +  ++D+K+ + +LR     AVE LR HI++GC+SD
Sbjct:  264 LLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSD 310          
BLAST of mRNA_A-nodosum_M_contig9317.4.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 4.100e-5
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    4 LLERFNLVVSVYGHLLDSKTKKPVLRREVLDAVERLRVHIKTGCISD 50
            LLERFNLV+  +  ++D+K+ + +LR     AVE LR HI++GC+SD
Sbjct:  264 LLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSD 310          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9317.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2K3DNP9_CHLRE1.590e-550.00Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
A0A6H5JPK9_9PHAE4.080e-548.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLP1_9PHAE4.100e-548.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9317contigA-nodosum_M_contig9317:13108..13266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9317.4.1mRNA_A-nodosum_M_contig9317.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9317 13108..13266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9317.4.1 ID=prot_A-nodosum_M_contig9317.4.1|Name=mRNA_A-nodosum_M_contig9317.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=53bp
SDELLERFNLVVSVYGHLLDSKTKKPVLRREVLDAVERLRVHIKTGCISD
SPA
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