prot_A-nodosum_M_contig931.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig931.10.1
Unique Nameprot_A-nodosum_M_contig931.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length252
Homology
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BLAST of mRNA_A-nodosum_M_contig931.10.1 vs. uniprot
Match: D7G1K8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1K8_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 1.200e-86
Identity = 164/316 (51.90%), Postives = 194/316 (61.39%), Query Frame = 0 
Query:    1 MRSDVA--IGLLGLAICGVASAAPTYSCFDPPAIEGQTNPFGASMDDVVEAECCEALIDENDLLAGRLVAWDPINCNHGPDGPAIAEAFLCRAHDTDGCRFCHLSCDGFEGLCITCDEIYSA---TATPTPAPNLDT------PAPFMI--------------PTP-----------------------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXTMDDCECLGNMTDTETEVLTIRGKTMRCDPTCSNGEDTVWGVLNCNYFGLGQDCRTCADTCEDQSDGLWLDQYGAFCKPCYAI 250
            MRSD+A  I    L++C V SAAPTYSCFDPP  EGQTNP G  M+DVVE+ECCEALIDE+D++A R V WDP+NCNHGP    IAEA+LCRAHDTDGCRFCH SCDG+EGLCITC+E+      + +PTP+P+ +T      PAP ++              P P                                          XXXXXXXXXXXXXXXXXXX         DCEC+ ++++ E  VLT R K M CDPTCS+  D VWGV+NCNYF LGQ+CR C+D C+DQ DG WLDQ G  CKPC AI
Sbjct:    1 MRSDIATVIAFGLLSVCPV-SAAPTYSCFDPPD-EGQTNPLGEGMEDVVESECCEALIDESDMMADREVIWDPVNCNHGPGDEPIAEAYLCRAHDTDGCRFCHDSCDGYEGLCITCEEVLEDLLNSDSPTPSPDFETSEFPATPAPAILTAATEAPFGIFPATPAPVAPVXXPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPTAEASDCECVNSLSEEEMAVLTRRSKNMVCDPTCSDQSDLVWGVMNCNYFALGQNCRACSDLCDDQGDGTWLDQDGFPCKPCSAI 314
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig931.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1K8_ECTSI1.200e-8651.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig931contigA-nodosum_M_contig931:266244..270865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig931.10.1mRNA_A-nodosum_M_contig931.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig931 266244..270909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig931.10.1 ID=prot_A-nodosum_M_contig931.10.1|Name=mRNA_A-nodosum_M_contig931.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=252bp
MRSDVAIGLLGLAICGVASAAPTYSCFDPPAIEGQTNPFGASMDDVVEAE
CCEALIDENDLLAGRLVAWDPINCNHGPDGPAIAEAFLCRAHDTDGCRFC
HLSCDGFEGLCITCDEIYSATATPTPAPNLDTPAPFMIPTPSPTPSPTPS
PTPAPIPSPTPAPTPAPTMDDCECLGNMTDTETEVLTIRGKTMRCDPTCS
NGEDTVWGVLNCNYFGLGQDCRTCADTCEDQSDGLWLDQYGAFCKPCYAI
P*
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