prot_A-nodosum_M_contig9301.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9301.1.1
Unique Nameprot_A-nodosum_M_contig9301.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length204
Homology
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BLAST of mRNA_A-nodosum_M_contig9301.1.1 vs. uniprot
Match: A0A6H5KEM7_9PHAE (Tafazzin family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM7_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.040e-39
Identity = 91/206 (44.17%), Postives = 117/206 (56.80%), Query Frame = 0 
Query:    1 MRWAMCTDDIT-TPACLKKILIAGKPCPSSAAVGWSSPSSSVFPEAREG-HWGHIFAEGSIRQPWRFSRESRYLRTSRPDRSTSVAQRESTDGTPDLPH--RHAPGGAGNPGPEGRPRKLVKKLPNIGRKILVYVGDPIDVGPVVRKCRERMA-TRHLPWTKRLSRAEIECHQEIAAFVRDHVLKLEEIARRLLWQRTGDLCPYAV 201
            MRWA+CTDDI      LK I  AG+  P     G   P    F +  EG  WGHIFAEG+IRQPWRFSR    L   +      + + +       + H   H           GR  KL+K +PN GR + VYVG+PIDV P++ KCRER+   R+LPWTKR S  E+ CH+EIAA++R+HVLKLE +AR+  +    D  PYA+
Sbjct:  241 MRWALCTDDIYYAHPVLKNIFDAGRTLPIKRNRGMEQPLFKAFFQKLEGGEWGHIFAEGAIRQPWRFSRGEPILGDFKAGIGRLLLRSKDPPLVLPMYHIGMHQIASEAPTHKRGR-GKLLKIMPNFGRTVRVYVGEPIDVAPIIEKCRERIGDVRNLPWTKRSSMEEVACHREIAAYIREHVLKLEAVARKDYYGDDPDASPYAL 445
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BLAST of mRNA_A-nodosum_M_contig9301.1.1 vs. uniprot
Match: D8LB90_ECTSI (Tafazzin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB90_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 3.990e-10
Identity = 38/74 (51.35%), Postives = 43/74 (58.11%), Query Frame = 0 
Query:    1 MRWAMCTDDIT-TPACLKKILIAGKPCPSSAAVGWSSPSSSVFPEAREG-HWGHIFAEGSIRQPWRFSRESRYL 72
            MRWA+CTDDI      LK I  AG+  P     G   P    F +  EG  WGHIFAEG+IRQPWRFSR+   L
Sbjct:  232 MRWALCTDDIYYAHPVLKNIFEAGRTLPIKRTRGMEQPLFKAFFQKLEGGEWGHIFAEGAIRQPWRFSRDEPIL 305
[Close]
BLAST of mRNA_A-nodosum_M_contig9301.1.1 vs. uniprot
Match: A0A835Z8H0_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.370e-7
Identity = 31/85 (36.47%), Postives = 54/85 (63.53%), Query Frame = 0 
Query:  113 PRKLVKKLP---NIGRKILVYVGDPIDVGPVVRKCRERMATRH-------LPWTKRLSRAEIECHQEIAAFVRDHVLKLEEIARR 187
            PR+   KL    ++GR++ +YVG+P++V  ++ K ++    +         PW++R + AE+ CH+EI A +RD VL+LE++ARR
Sbjct:  286 PRRAAAKLQRAFSVGRQVRMYVGEPVEVEHILNKWKQGWDGQEGIGDVSKFPWSERGTLAELACHEEITAAIRDAVLELEKVARR 370
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9301.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KEM7_9PHAE1.040e-3944.17Tafazzin family protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB90_ECTSI3.990e-1051.35Tafazzin family protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8H0_9STRA1.370e-736.47Tafazzin family protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9301contigA-nodosum_M_contig9301:13072..15461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9301.1.1mRNA_A-nodosum_M_contig9301.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9301 12498..18455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9301.1.1 ID=prot_A-nodosum_M_contig9301.1.1|Name=mRNA_A-nodosum_M_contig9301.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=204bp
MRWAMCTDDITTPACLKKILIAGKPCPSSAAVGWSSPSSSVFPEAREGHW
GHIFAEGSIRQPWRFSRESRYLRTSRPDRSTSVAQRESTDGTPDLPHRHA
PGGAGNPGPEGRPRKLVKKLPNIGRKILVYVGDPIDVGPVVRKCRERMAT
RHLPWTKRLSRAEIECHQEIAAFVRDHVLKLEEIARRLLWQRTGDLCPYA
VAE*
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