prot_A-nodosum_M_contig93.72.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig93.72.3
Unique Nameprot_A-nodosum_M_contig93.72.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length494
Homology
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BLAST of mRNA_A-nodosum_M_contig93.72.3 vs. uniprot
Match: D7G5Q2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q2_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 1.940e-93
Identity = 195/331 (58.91%), Postives = 225/331 (67.98%), Query Frame = 0 
Query:    1 MEANGADPR------GAAIQQALEDLKQKKGSVDQVVDYCEASYLEPGANKRETFLRTEEYLKDALGSVVIDIEDMAINLMAFVDAQADAVDKVTSDVLVAKTRLLRAREQSAATRLLSLRKVAQETPARQKIVVLTGAERPKKCRPLAPRPKISLQEKLAGIYADEP-TPLPLKLESAALAEDAS--VEDIRSAEGSIEFWGEHSPLRQGASDFNSSSANGALDSPTPRGRGISASSA------DTSLGTKGSFRENRGGG----MKKGRSDAAGSSQSSAIAPVAAPVMAPPPPARDPVVA-KRRSLKGIRPVGSSVSAPPPLVSRAKP 311
            ME NG +        G  IQ AL+ LK+KKGSVDQVVDYCE+SYLEPGANKRE +LRTEEYLKDALGSVV DIEDMAINL+ FV+AQA+AV+KVTSDV++AKTRL RAREQSAATRLL LR+ A ETPARQKIVVLTG+ERP KCRPL PR +ISL+EKL GIYADEP + L L  +S  L   A+  + D  S   + + WGEH+      S  +SS   G  D P+P   G    S        +S     S RE   GG     KK R D A +++  A+APV  P MAPPPPARDPVV  KR S K  RP G +V APPPLVSRAKP
Sbjct:    1 MERNGVEEMNQLGGSGGTIQLALDALKEKKGSVDQVVDYCESSYLEPGANKREVWLRTEEYLKDALGSVVADIEDMAINLLTFVNAQAEAVEKVTSDVVIAKTRLNRAREQSAATRLLELRRAAGETPARQKIVVLTGSERPTKCRPLPPRRRISLKEKLGGIYADEPPSSLSLASDSGTLPGSAAAGLGDAGSVAETADMWGEHN------SSPSSSRVGGISDLPSPSVGGDGGGSPRSFKPDGSSASPAASPREAAAGGGDSASKKDRLDLAAAARK-AVAPVPVPTMAPPPPARDPVVMNKRLSAKQARPAGGAVGAPPPLVSRAKP 324
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BLAST of mRNA_A-nodosum_M_contig93.72.3 vs. uniprot
Match: A0A6H5JRA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA6_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 1.080e-84
Identity = 186/331 (56.19%), Postives = 219/331 (66.16%), Query Frame = 0 
Query:    1 MEANGADPR------GAAIQQALEDLKQKKGSVDQVVDYCEASYLEPGANKRETFLRTEEYLKDALGSVVIDIEDMAINLMAFVDAQADAVDKVTSDVLVAKTRLLRAREQSAATRLLSLRKVAQETPARQKIVVLTGAERPKKCRPLAPRPKISLQEKLAGIYADEP-TPLPLKLESAALAEDAS--VEDIRSAEGSIEFWGEH--SPLRQ---GASDFNSSSANGALDSPT---PRGRGISASSADTSLGTKGSFRENRGGGMKKGRSDAAGSSQSS--AIAPVAAPVMAPPPPARDPVVA-KRRSLKGIRPVGSSVSAPPPLVSRAKP 311
            ME+NG +        G  IQ AL+ LK+KKGSVDQVVDYCE+SYLEPGANKRE +LRTEEYLKDALGSVV DIE+MAINL+ FV+AQA+AV+KVTSDV++AKTRL RARE SAATRLL LR+ A ETPARQKIVVLTG+ERP KCRPL PR +ISL+EKL GIYADEP + L L  +SA L   A+  + D  S   + + WGEH  SP      G SD  S S  G   SP    P G   S +++              GGG +  + D  G + ++  A+APV         PARDPVV  KR S K  RP G +V APPPLVSRAKP
Sbjct:    1 MESNGVEEMNQLGGSGGTIQLALDALKEKKGSVDQVVDYCESSYLEPGANKREVWLRTEEYLKDALGSVVTDIEEMAINLLTFVNAQAEAVEKVTSDVVIAKTRLNRARELSAATRLLDLRRAAGETPARQKIVVLTGSERPTKCRPLPPRRRISLKEKLGGIYADEPPSSLSLASDSATLPGSAAAGLGDTGSVAETADMWGEHNSSPSSSRVGGISDLPSPSVGGGGGSPRSFKPDGSSASPAASPREAAA--------GGGDRASKKDRLGLAAAARKAVAPVXXXXXXXXXPARDPVVMNKRLSTKQPRPAGGAVGAPPPLVSRAKP 323
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.72.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5Q2_ECTSI1.940e-9358.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRA6_9PHAE1.080e-8456.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 300..312
score: 32.31
coord: 394..419
score: 37.69
coord: 269..285
score: 27.06
coord: 316..337
score: 27.27
coord: 373..390
score: 36.67
NoneNo IPR availableGENE3D6.10.140.1620coord: 10..105
e-value: 5.8E-13
score: 50.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig93contigA-nodosum_M_contig93:912737..926142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig93.72.3mRNA_A-nodosum_M_contig93.72.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig93 912725..926142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig93.72.3 ID=prot_A-nodosum_M_contig93.72.3|Name=mRNA_A-nodosum_M_contig93.72.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=494bp
MEANGADPRGAAIQQALEDLKQKKGSVDQVVDYCEASYLEPGANKRETFL
RTEEYLKDALGSVVIDIEDMAINLMAFVDAQADAVDKVTSDVLVAKTRLL
RAREQSAATRLLSLRKVAQETPARQKIVVLTGAERPKKCRPLAPRPKISL
QEKLAGIYADEPTPLPLKLESAALAEDASVEDIRSAEGSIEFWGEHSPLR
QGASDFNSSSANGALDSPTPRGRGISASSADTSLGTKGSFRENRGGGMKK
GRSDAAGSSQSSAIAPVAAPVMAPPPPARDPVVAKRRSLKGIRPVGSSVS
APPPLVSRAKPGAPPPLLSQASRAPAGASVKPPPPPPPSLSHGSNLYGGG
DSRSLPPPPPPMAPNPHDAEGGMNPPPPPLPRPPPPAVSGSVPQFTPPPP
PPPSKPASAPAPQPPLPPPRTSQSQVAPPPPPPPPPPLPPVPSSQPQPPS
FQLLPPTGFQPPPPPLPRAAAQPPLPPPPPSASQAEFARPSVPP
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