prot_A-nodosum_M_contig93.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig93.12.1
Unique Nameprot_A-nodosum_M_contig93.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length445
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig93.12.1 vs. uniprot
Match: A0A835YQG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG9_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.370e-20
Identity = 58/137 (42.34%), Postives = 73/137 (53.28%), Query Frame = 0 
Query:  307 RRVWGRTEFIHTGWHPQYNVETPPS---MNDHIWNPPRGSVSGVRTHKILLPPSSEVERRTLTQDRHAWAGVPVGISWRRSTPARLGPPPRPGTLDAARSVPPLFG------AEQGIDGWRMATKYNWLPAPLISKA 434
            RR WGR  F+HTGW PQ       S   +  H   PPR + +G+R   + LPP +E + + L  D   W GVPV  + R+  P  LGPPPRPGT   A S P L G      A +G  G +  TKY WLPA L++ A
Sbjct:  206 RRAWGRAAFVHTGWRPQRGAAAAWSAAELEAHAAAPPRATAAGLRVSCVTLPPRTEWDLKLLAGDGAVWVGVPVATAPRKCKPPPLGPPPRPGTA-GAWSPPRLAGRGEAGGAGEG-GGHQFVTKYTWLPASLLAGA 340
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YQG9_9STRA3.370e-2042.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..23
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 174..203
score: 7.2907
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 247..276
score: 9.139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig93contigA-nodosum_M_contig93:63048..70850 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig93.12.1mRNA_A-nodosum_M_contig93.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig93 62956..70993 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig93.12.1 ID=prot_A-nodosum_M_contig93.12.1|Name=mRNA_A-nodosum_M_contig93.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=445bp
MKKNVNHGRRANDNSWKEILKSPGRKLASEVSSRISKGQEEGLKGFKGLI
YSVGSLGSSKGRGAEDEDDDDDDGDMKSQASQISALSFLSEGMRVLASKG
ANLFKRGPSLPDDKSASDESTGKFSSIETLMTDVKGADDGLPSTSAAAGL
RWRGVRMIVRGVRGECCGLAKTVRYRAARRIQVQARMQLARKAIIDRQKT
ARAARLWGEERRLRRRQRESNAKKRCKQIYRKEGERILEWSLKSFMQPRA
VVDLQRVWRGHRARKRTNAHLKRLERKARRQKKYERYLNALAALRGAGDG
RSEQIKRRVWGRTEFIHTGWHPQYNVETPPSMNDHIWNPPRGSVSGVRTH
KILLPPSSEVERRTLTQDRHAWAGVPVGISWRRSTPARLGPPPRPGTLDA
ARSVPPLFGAEQGIDGWRMATKYNWLPAPLISKAGLLQTPMMDS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS