prot_A-nodosum_M_contig927.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig927.4.1
Unique Nameprot_A-nodosum_M_contig927.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length441
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig927.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 189..216
e-value: 4.6E-5
score: 23.5
coord: 343..385
e-value: 9.2E-9
score: 35.3
coord: 277..320
e-value: 5.3E-8
score: 32.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 134..433
e-value: 1.2E-8
score: 35.8
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 151..347
coord: 199..421
NoneNo IPR availablePANTHERPTHR32134:SF153SUBFAMILY NOT NAMEDcoord: 151..347
coord: 199..421
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 138..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig927contigA-nodosum_M_contig927:211745..235707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig927.4.1mRNA_A-nodosum_M_contig927.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig927 210461..236022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig927.4.1 ID=prot_A-nodosum_M_contig927.4.1|Name=mRNA_A-nodosum_M_contig927.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=441bp
MEASKRLALGASAEAATTELSGNSLALDALLIALVNGCSADRQWYVPTGK
LQLACLQLCTGCRDLKLAARRLVVTSHTPHRLWLRSEKEKDKTKQGASRV
PTFAIHSVTWAMSAECISEGSTLLEEEPILTRGNQKQTFLRMEARGFRFY
KAWWPESLRELRFGEYFNEDIGDVVWPTLMRRLTFGREFNQPIDEVTWPA
TLTYLTFGRNFDQPIDEVVWSISLQQLTFGEYFDQEIENVLWPKFLQRLS
FGYCFEYAIDTVTWPKFLKELTLGYRFSQPIDDVVWPSSLQYLSLGDEFN
EPVENIVWPQSLHRLTFGEFFNQPVIGVTWPNSLQQLTFGYNFNRPIEGV
TWPASLQMLAFGWYFNQPISNVVWPDSLQQLTFGRKFNQSLSNVRWPSSL
QRLTLEVWSWKIYKAGWPPSLKQVVVRGISYSVSSGLIHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf