prot_A-nodosum_M_contig9265.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9265.4.1
Unique Nameprot_A-nodosum_M_contig9265.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length51
Homology
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BLAST of mRNA_A-nodosum_M_contig9265.4.1 vs. uniprot
Match: D8LEW9_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW9_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 7.600e-14
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    8 DVSFGKAHLRTFYCFDVKKHHYVAFVHNSGRGEWLLLDDDKAIP 51
            +VS GKA LR F+CF V+KHHYVAFV+N  R EWLLLDDD+A+P
Sbjct: 1847 EVSAGKAQLRGFFCFQVQKHHYVAFVYNRDRQEWLLLDDDQAVP 1890
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BLAST of mRNA_A-nodosum_M_contig9265.4.1 vs. uniprot
Match: A0A6H5KBH4_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.950e-13
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    8 DVSFGKAHLRTFYCFDVKKHHYVAFVHNSGRGEWLLLDDDKAIP 51
            +VS GKA LR F+CF V+ HHYVAFV+N  R EWLLLDDD+A+P
Sbjct: 2390 EVSAGKAQLRGFFCFQVQMHHYVAFVYNRDRQEWLLLDDDQAVP 2433
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9265.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEW9_ECTSI7.600e-1470.45USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KBH4_9PHAE4.950e-1368.18USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9265contigA-nodosum_M_contig9265:5624..6134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9265.4.1mRNA_A-nodosum_M_contig9265.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9265 5624..6158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9265.4.1 ID=prot_A-nodosum_M_contig9265.4.1|Name=mRNA_A-nodosum_M_contig9265.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=51bp
MVWPLEEDVSFGKAHLRTFYCFDVKKHHYVAFVHNSGRGEWLLLDDDKAI
P
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