prot_A-nodosum_M_contig92.57.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig92.57.2
Unique Nameprot_A-nodosum_M_contig92.57.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1046
Homology
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BLAST of mRNA_A-nodosum_M_contig92.57.2 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.270e-6
Identity = 73/202 (36.14%), Postives = 96/202 (47.52%), Query Frame = 0 
Query:   94 SATVSAANEQTHLDHDAAPILRLPVSKMAADPSGSGSXXXXXXXXXXAARFTASSP--LSARSPAASAYVANLTTSKSSDVEHPRPK-RTPRSGKVNSYVQAIETKNPSPAIKREDTVGGWSTYGRTSAGRGGGSGGASP------------AKVPEGSATKGTTPVPGVGVSGAVPGVSVVVQGGSLPKTEGGVDAPSVEV 280
            SA ++A N       D  PI+ LP SK A D +G+G+          A   +  +P  L+ARSPAASAYVA+++T K+     P P+ R    G V+    AIE K PSP + RE   G    +GR S+      GG +P            A VPE    K     PG  V+G    VSV   GGS+P  EGG   P+ +V
Sbjct:  294 SAAIAAPNASVSAQ-DGTPIMTLPQSKQAVDATGAGAVAAMP-----APPSSGGTPYTLAARSPAASAYVASISTPKADAGTTPEPRIRFSSGGVVSRLAAAIEHKGPSPVVGREGAGG----FGRGSSFALEKEGGGAPNVEGSVDVPGADANVPEMRDPK----APGAEVTGVGGDVSV---GGSMPSVEGGAALPTAKV 478
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig92.57.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB94_ECTSI1.270e-636.14Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 803..858
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..775
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 713..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 872..993
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..482
NoneNo IPR availablePANTHERPTHR23348PERIAXIN/AHNAKcoord: 96..1041
NoneNo IPR availablePANTHERPTHR23348:SF16VESICLE-ASSOCIATED PROTEINcoord: 96..1041

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig92contigA-nodosum_M_contig92:739946..747809 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig92.57.2mRNA_A-nodosum_M_contig92.57.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig92 733325..748465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig92.57.2 ID=prot_A-nodosum_M_contig92.57.2|Name=mRNA_A-nodosum_M_contig92.57.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1046bp
MPSSGGSSSATGRPPMQWGTPQRGQDVDTAPMGGAKTTTLGVSDKPPTIG
RGSASSPLSGGVQAGEGPTSGMSSVVGADTSKPPMTGDLDVPPSATVSAA
NEQTHLDHDAAPILRLPVSKMAADPSGSGSGSASGSTSGSAARFTASSPL
SARSPAASAYVANLTTSKSSDVEHPRPKRTPRSGKVNSYVQAIETKNPSP
AIKREDTVGGWSTYGRTSAGRGGGSGGASPAKVPEGSATKGTTPVPGVGV
SGAVPGVSVVVQGGSLPKTEGGVDAPSVEVSVRVPDVGVSPSGDASSGGE
VKVSVPGDGPKIEGETIIPDAGASSSNLPTASVDAPPLDVKPKKRFPSFG
TFSFPSSKGKKEVSGFSAPAVEASGSVPADASESKKSVPALDVKVSVPDK
GVSAPGASATAPKVDVDVDVGESAMAPDVELSGDVPSSELDASLPSAVPK
ADVEVKVGGVGGRGDVDAEVPGTPSVEVKKPKTTINRITNLFKKSLSKGK
VEEPDVPGGDAPTPDVSASVPVKSAPSTDDGVTVPAPSLAANVSGVEVVP
EAPSVGVGSKAPEEPSGSVSVHKVPSDVPSIGKAEVSAPDVSGSIPSVNI
SAPGVKIDVCVPWVDADRKAPNVTMSGPNVGAPKSDMSVSAPDVPDINES
ASGVSIAAPEMTDEIPPPKIGGSLLSADVPDINESASGVNITAPEVTDEI
PPARKGGSLPSANVPDINESASGVNITEPEVTDEIPPPKTGGSLPSADFG
SKDSVVPPGVTKSASTPAEGVSAPDVNVDVAAPDVKVDVSATSLGTGGKA
ANVSLSAPDVPDIDESGSDVNNATPEVTDEIPSAKLGDSLPTADVKAPES
PSAEAGMSEAVLGFIGSLFTSKTTDDADVSAPNVDGTKMRETSADVPGPL
PSASGEASPPSFPGGALEVPGVESGLKGPDMPSVDVSSVDGKEDASTPDV
KVGVSAPSVDVPSLDGKEDASTPDVKVDVSAPSVDVPSVDGKVDASTPDV
KVVVSAPSVDVPSVDGKEDASTPMVVVVSVDVPSVEGKVDASTPM*
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