prot_A-nodosum_M_contig9196.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9196.7.1
Unique Nameprot_A-nodosum_M_contig9196.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length49
Homology
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BLAST of mRNA_A-nodosum_M_contig9196.7.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 3.200e-10
Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 0 
Query:    1 AFSEEQIHEHVKSLDSGMHLTQERIQ-----------------------------------IISHPMDLGTIARKLDKQGSGGY 49
            AF+E+QI  HVKSLD+GMH++QERIQ                                   II+HPMDLGT+ARKL K+G+GGY
Sbjct:  391 AFTEDQILNHVKSLDTGMHVSQERIQAAAGAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGY 474
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BLAST of mRNA_A-nodosum_M_contig9196.7.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.380e-10
Identity = 38/88 (43.18%), Postives = 46/88 (52.27%), Query Frame = 0 
Query:    1 AFSEEQIHEHVKSLDSGMHLTQERIQ---------------------------------------IISHPMDLGTIARKLDKQGSGGY 49
            AF+EEQI  HVKSLD+GMH++QERIQ                                       II+HPMDLGT+ARKL K+G+GGY
Sbjct: 1299 AFTEEQILNHVKSLDTGMHVSQERIQAAAGAVLTKLRNSTFGWVFNDPVDPVYLNLPDYFEASRRIITHPMDLGTVARKLAKEGAGGY 1386
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9196.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPT9_ECTSI3.200e-1044.05Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KPY4_9PHAE4.380e-1043.18Histone acetyltransferase n=1 Tax=Ectocarpus sp. C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 26..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9196contigA-nodosum_M_contig9196:14364..15167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9196.7.1mRNA_A-nodosum_M_contig9196.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9196 14364..15168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9196.7.1 ID=prot_A-nodosum_M_contig9196.7.1|Name=mRNA_A-nodosum_M_contig9196.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=49bp
AFSEEQIHEHVKSLDSGMHLTQERIQIISHPMDLGTIARKLDKQGSGGY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf