prot_A-nodosum_M_contig918.25.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig918.25.2
Unique Nameprot_A-nodosum_M_contig918.25.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length402
Homology
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BLAST of mRNA_A-nodosum_M_contig918.25.2 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 3.590e-51
Identity = 147/382 (38.48%), Postives = 188/382 (49.21%), Query Frame = 0 
Query:    9 EYLNINDIFTSREIASRDRSPLEGDIDSFVNLEPYRREVVAQRPTTFGHRPASASRMFNPSALVTSS--PVNGRAIFGSHIFCSRKAEPKETRIKYATKATAKRGKKRRALGLSAPMLKELLCGKNQDHKRG-------------------VLATDTTT------------LGVAGTKGNSSGDPKERMGSQCGTGLSFTDDIVDAWGQRPLKATSTSPLSHLEICMG--KEGAQSSETTILREIFSENRPPWDGTLVPLPRPQDVRRPINKLSFPKADESLRDKLTRSRKLAAGIPVTLSGTHDEATQSAPDAQPK---RGEEQPTTPRTFIARQELKRLREMRLERDKSMARHIRLAERSALHMKIPPSEHLYQYTLDQA 352
            E+ N+    + R +   DR  +E D+D+   LEPYRREVVAQ+P TFGHRP SASRMFNP  + TS   P +G       I   +K            +   +  K RR  GLSAPMLK LL G     + G                   +++ D+              L  +        + K R     G G +  +  +++W    L+ +S S L H    +G  KEG +      L  IFS  RPPWDG   PLP PQ  RR I+ L  P  DE LRDKL +SRK AAG+PVT S T DE  +      P    R E  P TPR  IARQE++RL E+R ERD++MA+ +R AE S L  KI PSE LY+ TL  A
Sbjct:  114 EFFNMERGMSGRVLHPTDR--VEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRGRKKGGGGHXXXXXXXRG--RNSKPRRTTGLSAPMLKALLRGDTPTGEGGAALVTASQHQQELFEPNGNIVSRDSAPKPNYLVLDGQEDLTDSSVNSEKLDESKWRSVDDLGRGEALGE--LESW----LQTSSHSGLGHGRRRLGNTKEGQE------LHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIA 479
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig918.25.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2S4_9PHAE3.590e-5138.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig918contigA-nodosum_M_contig918:186487..188217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig918.25.2mRNA_A-nodosum_M_contig918.25.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig918 186323..263172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig918.25.2 ID=prot_A-nodosum_M_contig918.25.2|Name=mRNA_A-nodosum_M_contig918.25.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=402bp
MKVLSSSLEYLNINDIFTSREIASRDRSPLEGDIDSFVNLEPYRREVVAQ
RPTTFGHRPASASRMFNPSALVTSSPVNGRAIFGSHIFCSRKAEPKETRI
KYATKATAKRGKKRRALGLSAPMLKELLCGKNQDHKRGVLATDTTTLGVA
GTKGNSSGDPKERMGSQCGTGLSFTDDIVDAWGQRPLKATSTSPLSHLEI
CMGKEGAQSSETTILREIFSENRPPWDGTLVPLPRPQDVRRPINKLSFPK
ADESLRDKLTRSRKLAAGIPVTLSGTHDEATQSAPDAQPKRGEEQPTTPR
TFIARQELKRLREMRLERDKSMARHIRLAERSALHMKIPPSEHLYQYTLD
QAFKPRTMPGRESLAKTRSRYRRGSMPLYIDGATPVPKSPKTHSGTLTRK
S*
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