prot_A-nodosum_M_contig918.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig918.1.1
Unique Nameprot_A-nodosum_M_contig918.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length248
Homology
BLAST of mRNA_A-nodosum_M_contig918.1.1 vs. uniprot
Match: A0A6H5JK83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK83_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.880e-34
Identity = 75/152 (49.34%), Postives = 96/152 (63.16%), Query Frame = 0
Query:   66 DVVALMNQLQGVYLSLGNAPVWGGGSSRPGEEFAVVCGFSAALGPLLLERALDAVYGRKLFPTVTSLPLAHVIYMFRVYWQNEVSPFDAHDRFFRMVA------NPETGTITKMELEPFVLAIAERHPDLNSLSLEEVSQYVNTVLAVVFHR 211
            D+  LM QLQG  L LG A VWGGG  R  E F+  CGFSAA GP++L+    AVYGR     VT LP+ HV+Y F  YW+ E+ P DA +RFF++V          +G I + EL  FVLAIA RHPDL++LS E    YV+TVL ++F++
Sbjct:  456 DLWPLMFQLQGWSLELGTADVWGGGIEREAEAFSAACGFSAAFGPIVLKLVTTAVYGRVFAGGVTVLPMNHVLYAFGQYWEKEIGPRDATERFFKLVKIDSGTRASSSGRIGREELRQFVLAIALRHPDLDALSPENKFIYVDTVLTILFYK 607          
BLAST of mRNA_A-nodosum_M_contig918.1.1 vs. uniprot
Match: D7FYR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR0_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.840e-33
Identity = 72/146 (49.32%), Postives = 93/146 (63.70%), Query Frame = 0
Query:   66 DVVALMNQLQGVYLSLGNAPVWGGGSSRPGEEFAVVCGFSAALGPLLLERALDAVYGRKLFPTVTSLPLAHVIYMFRVYWQNEVSPFDAHDRFFRMVANPETGTITKMELEPFVLAIAERHPDLNSLSLEEVSQYVNTVLAVVFHR 211
            D+  LM QLQG  L LG A VWGGG  R  E F+  CGFSAA GP++L+    AVYGR     V+ LP+ HV+Y F  YW+ E+ P DA +RFF++V         K EL  FVLAIA RHPDL++L  +  S YV+TVL ++F++
Sbjct:  460 DLWPLMVQLQGWSLELGTADVWGGGVEREAEAFSAACGFSAAFGPIVLKLVTTAVYGRVFAGGVSVLPMDHVVYAFGQYWEKEIGPRDATERFFKLV---------KEELRRFVLAIALRHPDLDALPPDNKSIYVDTVLTILFYK 596          
BLAST of mRNA_A-nodosum_M_contig918.1.1 vs. uniprot
Match: A0A6U5KTW5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5KTW5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.750e-8
Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0
Query:  140 MFRVYWQNEVSPFDAHDRFFRMVANPETGTITKMELEPFVLAIAERHPDLNSLS--LEEVSQYVNTVLAVVFHRHSNC--GVLRSKDLKKSGFVASFNAVGRLE 239
            MF  +W +E++P+D H+RFFR+V  P+   I + +  P+V  + + HP L+ LS   E   +Y  TV+  +F+  + C  G +  + +++S  + +F+AV   E
Sbjct:  215 MFERFWNDEMAPYDRHERFFRLVKRPDRRYIHQEDFHPYVQELLDYHPGLDFLSNHTEFQEKYAVTVITRIFYVVNRCHNGKITVRQIRRSNLLDAFHAVDEEE 318          
BLAST of mRNA_A-nodosum_M_contig918.1.1 vs. uniprot
Match: A0A7S1BWJ4_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWJ4_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.940e-8
Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 0
Query:  140 MFRVYWQNEVSPFDAHDRFFRMVANPETGTITKMELEPFVLAIAERHPDLNSLS--LEEVSQYVNTVLAVVFHRHSNC--GVLRSKDLKKSGFVASFNAVGRLE 239
            MF  +W +E++P+D H+RFFR+V  P+   I + +  P+V  + + HP L+ LS   E   +Y  TV+  +F+  + C  G +  + +++S  + +F+AV   E
Sbjct:  215 MFERFWNDEMAPYDRHERFFRLVKRPDRRYIHQEDFHPYVQELLDYHPGLDFLSNHTEFQEKYAVTVITRIFYVVNRCHNGKITVRQIRRSNLLDAFHAVDEEE 318          
BLAST of mRNA_A-nodosum_M_contig918.1.1 vs. uniprot
Match: A0A448ZK08_9STRA (EF-hand domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK08_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.560e-8
Identity = 34/100 (34.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:  144 YWQNEVSPFDAHDRFFRMVANPETGTITKMELEPFVLAIAERHPDLNSLS--LEEVSQYVNTVLAVVFHRHSNC--GVLRSKDLKKSGFVASFNAVGRLE 239
            YW+ E+ PFDA +RFFR+V  P+   I + +  P++ A+   HP L  LS   E   +Y  TV+  +F+  + C  G + S+ +++S  + SF+ V   E
Sbjct:  233 YWKKEMEPFDASERFFRLVKQPDEDCILRDDFLPYIKALLNDHPGLEFLSNHAEFQEKYAVTVITRIFYSVNKCHSGRITSRQVRRSDLLDSFSQVDEEE 332          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig918.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JK83_9PHAE1.880e-3449.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYR0_ECTSI2.840e-3349.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U5KTW5_9STRA1.750e-831.73Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1BWJ4_9STRA1.940e-831.73Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A448ZK08_9STRA2.560e-834.00EF-hand domain-containing protein n=1 Tax=Pseudo-n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.220coord: 144..241
e-value: 5.3E-8
score: 34.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
IPR041534PP2A regulatory subunit B'', EF-hand domainPFAMPF17958EF-hand_13coord: 153..235
e-value: 8.5E-10
score: 38.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig918contigA-nodosum_M_contig918:4132..5361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig918.1.1mRNA_A-nodosum_M_contig918.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig918 1726..5362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig918.1.1 ID=prot_A-nodosum_M_contig918.1.1|Name=mRNA_A-nodosum_M_contig918.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=248bp
MECKGGDGGGGGGRKHAPQRGKIQFQVRRYNVPGFRWPVDTRRPSAFLWG
QAQTHGQQGQGNDNSDVVALMNQLQGVYLSLGNAPVWGGGSSRPGEEFAV
VCGFSAALGPLLLERALDAVYGRKLFPTVTSLPLAHVIYMFRVYWQNEVS
PFDAHDRFFRMVANPETGTITKMELEPFVLAIAERHPDLNSLSLEEVSQY
VNTVLAVVFHRHSNCGVLRSKDLKKSGFVASFNAVGRLEMSLEVWLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041534EF-hand_13